RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ZNF492Q9P255 531 aa-0.62□□□□□ -2.51
CALD1-218ENST00000478075 IL20RAQ9UHF4 553 aa-0.62□□□□□ -2.51
CALD1-218ENST00000478075 PSG8Q9UQ74 426 aa-0.62□□□□□ -2.51
CALD1-218ENST00000478075 CEMIPQ8WUJ3 1361 aa-0.62□□□□□ -2.51
CALD1-218ENST00000478075 DIDO1Q9BTC0 2240 aaKnown RBP-0.62□□□□□ -2.51
CALD1-218ENST00000478075 EPPK1P58107 5090 aaKnown RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 UBR4Q5T4S7 5183 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 TNRC6AQ8NDV7 1962 aaKnown RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 KMT2AQ03164 3969 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 KIAA1671Q9BY89 1806 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 SIGLEC16A6NMB1 481 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 D6RAR5 112 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 K7EMT4 169 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 DDX39AO00148 427 aaKnown RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 MFNGO00587 321 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 CXCL14O95715 111 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 IGLV7-43P04211 117 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 HEXBP07686 556 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 UQCRBP14927 111 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 IFNAR1P17181 557 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 TBXA2RP21731 343 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 YWHABP31946 246 aaKnown RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 TCF7P36402 384 aaPredicted RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 GALR1P47211 349 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 SPINK7P58062 85 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 MEP1BQ16820 701 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 MICBQ29980 383 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 IFI44LQ53G44 452 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 PRAMEF7Q5VXH5 474 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 LINC00173Q6ZV60 143 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 OLIG3Q7RTU3 272 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 KIAA1328Q86T90 577 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 TPRA1Q86W33 373 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 SLC25A45Q8N413 288 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 OR4K14Q8NGD5 310 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 OR5L2Q8NGL0 311 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 CCDC114Q96M63 670 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 ODF3Q96PU9 254 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.63□□□□□ -2.51
CALD1-218ENST00000478075 DUSP21Q9H596 190 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 LPAR2Q9HBW0 351 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 UBQLN4Q9NRR5 601 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 KCNIP1Q9NZI2 227 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 CTSFQ9UBX1 484 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 FAM153AQ9UHL3 310 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 RNF6Q9Y252 685 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 U3KQA8 63 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 ABCA2Q9BZC7 2435 aa-0.63□□□□□ -2.51
CALD1-218ENST00000478075 SONP18583 2426 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 HYDINQ4G0P3 5121 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 BRD4O60885 1362 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 IGKV2D-26A0A0A0MRZ7 120 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 TRGV4A0A0C4DH28 118 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 CCDC69A6NI79 296 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 H0YJW9 148 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 HIP1O00291 1037 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 CREB3O43889 395 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 UGT1A9O60656 530 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 LGALS2P05162 132 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 FGF9P31371 208 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 CTNNB1P35222 781 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 MAGEA6P43360 314 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 CNN1P51911 297 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 CRYBB1P53674 252 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 HSD17B7P56937 341 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 RBM3P98179 157 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SPP2Q13103 211 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 TSC22D1Q15714 1073 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SAMD4BQ5PRF9 694 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 TMEM69Q5SWH9 247 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 ZNF470Q6ECI4 717 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 APOBEC3HQ6NTF7 200 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 GEMIN6Q8WXD5 167 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 TRIM44Q96DX7 344 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SLC35A5Q9BS91 424 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 GABARAPL3Q9BY60 117 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 ALX4Q9H161 411 aaPredicted RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 UGT1A7Q9HAW7 530 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 UGT1A10Q9HAW8 530 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 UGT1A8Q9HAW9 530 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 EXOSC4Q9NPD3 245 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 DDX18Q9NVP1 670 aaKnown RBP-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SPATA7Q9P0W8 599 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 ANAPC7Q9UJX3 599 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 STAP1Q9ULZ2 295 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SNX5Q9Y5X3 404 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 U3KQK5 164 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 SPACA6W5XKT8 324 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 ZNF462Q96JM2 2506 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 COL4A2P08572 1712 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 STAB2Q8WWQ8 2551 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 FANCIQ9NVI1 1328 aa-0.64□□□□□ -2.51
CALD1-218ENST00000478075 FLNAP21333 2647 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 BRWD1Q9NSI6 2320 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 NSG1A0A0A6YYJ2 146 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 IGHV1OR15-9A0A0B4J2B8 117 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 A0A0D9SG42 100 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 A0A0U1RQG5 324 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 CIB4A0PJX0 185 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms