RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NANOGP1Q8N7R0 232 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 GATSQ8NAP1 163 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 NAXEQ8NCW5 288 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 OR14L1PQ8NHC6 308 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 C2CD4CQ8TF44 421 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 ABTB1Q969K4 478 aaPredicted RBP4.64□□□□□ -1.67
VPS45-207ENST00000477558 RPL36ALQ969Q0 106 aaKnown RBP4.64□□□□□ -1.67
VPS45-207ENST00000477558 EME1Q96AY2 570 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 JSRP1Q96MG2 331 aaPredicted RBP4.64□□□□□ -1.67
VPS45-207ENST00000477558 SFXN2Q96NB2 322 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 ZNF583Q96ND8 569 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 CCT8L2Q96SF2 557 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 PIGQQ9BRB3 760 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 TTYH2Q9BSA4 534 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 DKKL1Q9UK85 242 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 LAMP3Q9UQV4 416 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 ZNF443Q9Y2A4 671 aaPredicted RBP4.64□□□□□ -1.67
VPS45-207ENST00000477558 CARD8Q9Y2G2 431 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 ARL2BPQ9Y2Y0 163 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 AP4B1Q9Y6B7 739 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 NAV2Q8IVL1 2488 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 TEX15Q9BXT5 2789 aa4.64□□□□□ -1.67
VPS45-207ENST00000477558 C15orf38-AP3S2A0A0A6YYH1 394 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 TRGV8A0A0C4DH27 118 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 FAM220BPB1ANY3 271 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CCL21O00585 134 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 NPIPB7O75200 414 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 TRAPPC6AO75865 159 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 TNFSF13O75888 250 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 MFN2O95140 757 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CLDN1O95832 211 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CSTAP01040 98 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 UBTFL6P0CB48 400 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 NR2F1P10589 423 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 COX4I1P13073 169 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 HPGDP15428 266 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 PGCP20142 388 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 SHC1P29353 583 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 SLC6A8P48029 635 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 PCYT1AP49585 367 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZNF81P51508 661 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZNF41P51814 821 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 SUCLG1P53597 346 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 CASP6P55212 293 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CLDN20P56880 219 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 NUP107P57740 925 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 EPS8Q12929 822 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 HNRNPA0Q13151 305 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 SELENBP1Q13228 472 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ART3Q13508 389 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CYLC2Q14093 348 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 SCARB2Q14108 478 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 VEZF1Q14119 521 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CAPRIN1Q14444 709 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 QPRTQ15274 297 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 TOMM20Q15388 145 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 RBMS2Q15434 407 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 FBXL19-AS1Q494R0 122 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 GPAT3Q53EU6 434 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 RAET1LQ5VY80 246 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 C11orf87Q6NUJ2 197 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 XKRXQ6PP77 449 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ENPP6Q6UWR7 440 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 B3GNT6Q6ZMB0 384 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 NCCRP1Q6ZVX7 275 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 ARPINQ7Z6K5 226 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 FJX1Q86VR8 437 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 VRK2Q86Y07 508 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ANKRD13BQ86YJ7 626 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 SLC30A8Q8IWU4 369 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZNF440Q8IYI8 595 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 EID3Q8N140 333 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CLIP4Q8N3C7 705 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 LSMEM1Q8N8F7 131 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 PCYOX1LQ8NBM8 494 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 C11orf65Q8NCR3 313 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 GPR32P1Q8NGA4 272 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 OR52P1PQ8NH57 321 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 NFKBIDQ8NI38 313 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CNOT9Q92600 299 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 TAMM41Q96BW9 452 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 RCN3Q96D15 328 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 MSI2Q96DH6 328 aaKnown RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 SH3YL1Q96HL8 342 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 RNF145Q96MT1 663 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZFP3Q96NJ6 502 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 TUBA1CQ9BQE3 449 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CALHM2Q9HA72 323 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ACER3Q9NUN7 267 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 CMTM6Q9NX76 183 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 VDAC3Q9Y277 283 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 IFT52Q9Y366 437 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZNF337Q9Y3M9 751 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ZNF175Q9Y473 711 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 KLF2Q9Y5W3 355 aaPredicted RBP4.63□□□□□ -1.67
VPS45-207ENST00000477558 NOTCH2Q04721 2471 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 ABCA4P78363 2273 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 PDZD2O15018 2839 aa4.63□□□□□ -1.67
VPS45-207ENST00000477558 LOC100653049A0A140TA62 436 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms