RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DANCRP0C864 163 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CEACAM1P13688 526 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 VIPR1P32241 457 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 MPIP34949 423 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CTRLP40313 264 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 RPL35P42766 123 aaKnown RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 OR1G1P47890 313 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 REEP5Q00765 189 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 DUSP28Q4G0W2 176 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 HIKESHIQ53FT3 197 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 PRRT3Q5FWE3 981 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 THEM4Q5T1C6 240 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 IL31Q6EBC2 164 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 MED27Q6P2C8 311 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 TMEM88Q6PEY1 159 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 DLK2Q6UY11 383 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CARFQ8N187 725 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 NPEPL1Q8NDH3 523 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 FLVCR1-AS1Q8TAF5 88 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 RFKQ969G6 155 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 TMEM203Q969S6 136 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 C12orf66Q96MD2 445 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 NOL4LQ96MY1 436 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 SMCO4Q9NRQ5 59 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 C19orf12Q9NSK7 152 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ANGPT4Q9Y264 503 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 HS3ST3B1Q9Y662 390 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ZFHX4Q86UP3 3567 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 FRYQ5TBA9 3013 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 TRAV1-1A0A0B4J248 108 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 GGT3PA6NGU5 568 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 C2orf74A8MZ97 194 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 K7N7A8 449 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ADAP1O75689 374 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 KRT33AO76009 404 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 MOCS2O96007 188 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 F12P00748 615 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 TYMSP04818 313 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CRABP1P29762 137 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 GABRA4P48169 554 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CLDN12P56749 244 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CCL7P80098 99 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 PLIN5Q00G26 463 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 YWHAHQ04917 246 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 FABP9Q0Z7S8 132 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 MGAT2Q10469 447 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 SREBF2Q12772 1141 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 PDZK1IP1Q13113 114 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 DUSP8Q13202 625 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 GAS6Q14393 721 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ZNF260Q3ZCT1 412 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 MORN2Q502X0 79 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ACSM3Q53FZ2 586 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 KRBOX4Q5JUW0 171 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 TMEM71Q6P5X7 295 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CRTC1Q6UUV9 634 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ESPNLQ6ZVH7 1005 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 Q6ZVU0 165 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 NAA40Q86UY6 237 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 IQCHQ86VS3 1027 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 UBAC2Q8NBM4 344 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 APCDD1LQ8NCL9 501 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 OR51A2Q8NGJ7 313 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 OR51S1Q8NGJ8 323 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 OR52J3Q8NH60 311 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 SLC25A43Q8WUT9 341 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 WBP2Q969T9 261 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 WDR92Q96MX6 357 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 AMDHD1Q96NU7 426 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 SLC25A21Q9BQT8 299 aaPredicted RBP3.7□□□□□ -1.82
USP16-205ENST00000474835 ZNF559Q9BR84 538 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 CRB3Q9BUF7 120 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 NCOR1P1Q9H4R4 102 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 UBQLN4Q9NRR5 601 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ZMYM5Q9UJ78 669 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 ZNF222Q9UK12 451 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 KLK13Q9UKR3 277 aa3.7□□□□□ -1.82
USP16-205ENST00000474835 TRBV24-1A0A075B6N3 115 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CLEC18AA5D8T8 446 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 FAM86C2PA6NEL3 165 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ARL5CA6NH57 179 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 MSGN1A6NI15 193 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR4C45A6NMZ5 311 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 POM121CA8CG34 1229 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 K7EQS6 105 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SGCEO43556 437 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SOX14O95416 240 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ANXA2P07355 339 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 ALPPL2P10696 532 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 RAB6AP20340 208 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 NSG1P42857 185 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ERVFRD-1P60508 538 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ERVK-25P63136 954 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 MC1RQ01726 317 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 DHRS2Q13268 280 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 PIN1Q13526 163 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 KCNA10Q16322 511 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 HAGHQ16775 308 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 TRIM60Q495X7 471 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms