RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 EIF4E1BA6NMX2 242 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 E9PQ18 207 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC16A7O60669 478 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 MRPS14O60783 128 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 WDR1O75083 606 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 KHDRBS3O75525 346 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 WBP4O75554 376 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 CLPTM1O96005 669 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 PIPP12273 146 aaPredicted RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 HLA-DOBP13765 273 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF823P16415 610 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SPI1P17947 270 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 GABRB1P18505 474 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC25A1P53007 311 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ACTC1P68032 377 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ACTA1P68133 377 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 H3F3AP84243 136 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 RAB40BQ12829 278 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 CAMK2DQ13557 499 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC17A1Q14916 467 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SMN1Q16637 294 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 THEM4Q5T1C6 240 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 CREB3L2Q70SY1 520 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ABHD12BQ7Z5M8 362 aaPredicted RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 LSRQ86X29 649 aaPredicted RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SIAH3Q8IW03 269 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF100Q8IYN0 542 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 POMGNT2Q8NAT1 580 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 SYT14Q8NB59 555 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 OR51G2Q8NGK0 314 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 OR5M9Q8NGP3 310 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF519Q8TB69 540 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 FNDC9Q8TBE3 224 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ZPLD1Q8TCW7 415 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 RNF128Q8TEB7 428 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ABHD3Q8WU67 409 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 FAR1Q8WVX9 515 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 APH1BQ8WW43 257 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 INTS12Q96CB8 462 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 CRELD1Q96HD1 420 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 TMEM80Q96HE8 168 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 CNN2Q99439 309 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 TM9SF2Q99805 663 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 TUBA1CQ9BQE3 449 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 EMC6Q9BV81 110 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ULBP2Q9BZM5 246 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 UPB1Q9UBR1 384 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 ERGIC3Q9Y282 383 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 EMC9Q9Y3B6 208 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 FKBP7Q9Y680 259 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 A0A1W2PPL8 197 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 TMCC2O75069 709 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 TRMUO75648 421 aaKnown RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 GLCEO94923 617 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 GYPBP06028 91 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 YES1P07947 543 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 HOXD4P09016 255 aaPredicted RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 DCKP27707 260 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 CDKN2AP42771 156 aaKnown RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 MVKQ03426 396 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 ST3GAL4Q11206 333 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 EIF2S3LQ2VIR3 472 aaKnown RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 AADACL4Q5VUY2 407 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF773Q6PK81 442 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 PRSS48Q7RTY5 328 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 BCDIN3DQ7Z5W3 292 aaKnown RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 CD163Q86VB7 1156 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 UBE2J2Q8N2K1 259 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 NPEPL1Q8NDH3 523 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 BBS1Q8NFJ9 593 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 TXNDC15Q96J42 360 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 CDADC1Q9BWV3 514 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 CALHM2Q9HA72 323 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 GP6Q9HCN6 339 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 VSX1Q9NZR4 365 aaPredicted RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 B3GAT1Q9P2W7 334 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 PSORS1C1Q9UIG5 152 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 EXOSC1Q9Y3B2 195 aaKnown RBP9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 PCDHGB5Q9Y5G0 923 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 FLVCR1Q9Y5Y0 555 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 COMMD3-BMI1R4GMX3 469 aa9.15□□□□□ -0.94
PRPF38A-202ENST00000474048 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 PTPRQQ9UMZ3 2332 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 DAPL1A0PJW8 107 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC22A23A1A5C7 686 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 OR6C68A6NDL8 312 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF724A8MTY0 619 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF670-ZNF695F2Z2N8 137 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 PHYHO14832 338 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 RAMP1O60894 148 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 NOL3O60936 208 aaKnown RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 CDK1P06493 297 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 MRPL3P09001 348 aaKnown RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 PGA4P0DJD7 388 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 PGA3P0DJD8 388 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 GSTT1P30711 240 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms