RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TRABD2BA6NFA1 517 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CD8B2A6NJW9 211 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CLDN25C9JDP6 229 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 PSMD9O00233 223 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 GPR171O14626 319 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CXCL13O43927 109 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 RGS9O75916 674 aaPredicted RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 FARS2O95363 451 aaKnown RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 WDPCPO95876 746 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 APOA1P02647 267 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 OR8G3PP0DMU2 310 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CD8BP10966 210 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 PCMT1P22061 227 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 MAPK3P27361 379 aaPredicted RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 GABRA5P31644 462 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CD96P40200 585 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 LIMK1P53667 647 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 PPIAP62937 165 aaKnown RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 EIF2B1Q14232 305 aaKnown RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 GALEQ14376 348 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 LINC00114Q6XXX2 140 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 LRRC69Q6ZNQ3 347 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ESPNLQ6ZVH7 1005 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 AAED1Q7RTV5 226 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 KCTD20Q7Z5Y7 419 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 CEACAM19Q7Z692 300 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ALDH16A1Q8IZ83 802 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ZADH2Q8N4Q0 377 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF433Q8N7K0 673 aaPredicted RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF454Q8N9F8 522 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 OR2V1Q8NHB1 315 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 NDNFQ8TB73 568 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ASB17Q8WXJ9 295 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 BORCS5Q969J3 196 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 TSPAN32Q96QS1 320 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 TM9SF2Q99805 663 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 RBM24Q9BX46 236 aaKnown RBP3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 TCF7L1Q9HCS4 588 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 ISYNA1Q9NPH2 558 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 BRD7Q9NPI1 651 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 EMC3Q9P0I2 261 aa3.71□□□□□ -1.82
ATP13A3-206ENST00000461660 KIF26BQ2KJY2 2108 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 A0A1W2PQL4 384 aaPredicted RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 DCDC2BA2VCK2 349 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 METTL15A6NJ78 407 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 TMEM200CA6NKL6 621 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF593O00488 134 aaPredicted RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 NKX2-8O15522 239 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 RRP8O43159 456 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 GPRIN2O60269 458 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 LIMS3P0CW19 117 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 LIMS4P0CW20 117 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF17P17021 662 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 MST1P26927 711 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 UQCRC1P31930 480 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 PSMB10P40306 273 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 CDKN2AP42771 156 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 GDI2P50395 445 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 OR12D2P58182 307 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 EGR4Q05215 589 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SLC10A1Q14973 349 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SPCS2Q15005 226 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF766Q5HY98 468 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 DDI2Q5TDH0 399 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 CROCCP3Q8IVE0 287 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 PHC2Q8IXK0 858 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 UBE2J2Q8N2K1 259 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 NPEPL1Q8NDH3 523 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 PTP4A1Q93096 173 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 YIPF6Q96EC8 236 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 OPALINQ96PE5 141 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 KCNS3Q9BQ31 491 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 MMP27Q9H306 513 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 FKBP14Q9NWM8 211 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 KLHL13Q9P2N7 655 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 TRAPPC4Q9Y296 219 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 COA3Q9Y2R0 106 aaPredicted RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 EML5Q05BV3 1969 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ALPK2Q86TB3 2170 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 UNC80Q8N2C7 3258 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 WDR87Q6ZQQ6 2873 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 IGLV3-32A0A0A0MS00 114 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SLC35F4A4IF30 521 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 LOC110117498-PIK3R3F6TDL0 507 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 PDCD5O14737 125 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 TNFSF11O14788 317 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SLC43A1O75387 559 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 DXOO77932 396 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF24P17028 368 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SDC2P34741 201 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 SOX2P48431 317 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 CD97P48960 835 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 STARP49675 285 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 ENTPD1P49961 510 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 MEOX1P50221 254 aa3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 RPS4XP62701 263 aaKnown RBP3.7□□□□□ -1.82
ATP13A3-206ENST00000461660 RPS25P62851 125 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms