RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 ZIM3Q96PE6 472 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 OR52E6Q96RD3 313 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 GPA33Q99795 319 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 DENND2DQ9H6A0 471 aaPredicted RBP11.67□□□□□ -0.54
PABPC4-208ENST00000461578 ARMC7Q9H6L4 198 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 SLCO1C1Q9NYB5 712 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 NKIRAS2Q9NYR9 191 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 CALML5Q9NZT1 146 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 LEF1Q9UJU2 399 aaPredicted RBP11.67□□□□□ -0.54
PABPC4-208ENST00000461578 PRDM4Q9UKN5 801 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
PABPC4-208ENST00000461578 IGKV1D-42A0A075B6H8 117 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 TRAV36DV7A0A075B6V5 113 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 LOC102725191A0A1B0GVB3 256 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 ZNF726A6NNF4 738 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 SPRY3O43610 288 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 FZD7O75084 574 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 KRT75O95678 551 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 BPGMP07738 259 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
PABPC4-208ENST00000461578 ZNF250P15622 560 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 LBPP18428 481 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 DRD4P21917 467 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 IL12AP29459 219 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 PCGF2P35227 344 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 ATP4BP51164 291 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 DSTNP60981 165 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 KLF17Q5JT82 389 aaPredicted RBP11.66□□□□□ -0.54
PABPC4-208ENST00000461578 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
PABPC4-208ENST00000461578 TMEM19Q96HH6 336 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 PKNOX2Q96KN3 472 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 SH3GL3Q99963 347 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 RNF121Q9H920 327 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 SLC6A13Q9NSD5 602 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 PLEK2Q9NYT0 353 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 KLHL14Q9P2G3 628 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
PABPC4-208ENST00000461578 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 A0A087WUJ7 227 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 A0A1B0GWA3 101 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 WDR91A4D1P6 747 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 GPANK1O95872 356 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 AHCYP23526 432 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 RBMXP38159 391 aaKnown RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ZNF81P51508 661 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 MVDP53602 400 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 PMS2P3Q13401 168 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 HIST2H2BDQ6DRA6 164 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 C6orf89Q6UWU4 347 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 SPATC1Q76KD6 591 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 NET1Q7Z628 596 aaPredicted RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 SLC22A24Q8N4F4 322 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ADPRHL1Q8NDY3 354 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ELMOD3Q96FG2 381 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 PKP2Q99959 881 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ASPNQ9BXN1 380 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 NUF2Q9BZD4 464 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 PDP1Q9P0J1 537 aaPredicted RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 ARMCX1Q9P291 453 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 IFT52Q9Y366 437 aa11.65□□□□□ -0.54
PABPC4-208ENST00000461578 SOX21Q9Y651 276 aaPredicted RBP11.65□□□□□ -0.54
PABPC4-208ENST00000461578 NOTCH1P46531 2555 aa11.65□□□□□ -0.55
PABPC4-208ENST00000461578 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.55
PABPC4-208ENST00000461578 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 LRRN3E7EW58 273 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 C11orf98E9PRG8 122 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 RFXANKO14593 260 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
PABPC4-208ENST00000461578 FOXH1O75593 365 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 IGHV1-46P01743 117 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 MT-ND5P03915 603 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 ALDOCP09972 364 aaKnown RBP11.64□□□□□ -0.55
PABPC4-208ENST00000461578 MYZAPP0CAP1 466 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 HTR2AP28223 471 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 GCH1P30793 250 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 BIDP55957 195 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 PUDPQ08623 228 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 ZNF154Q13106 437 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 TBC1D28Q2M2D7 210 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 GTDC1Q4AE62 458 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 ALG10BQ5I7T1 473 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 C5orf46Q6UWT4 87 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 PIWIL3Q7Z3Z3 882 aaKnown RBP11.64□□□□□ -0.55
PABPC4-208ENST00000461578 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 C10orf53Q8N6V4 93 aa11.64□□□□□ -0.55
PABPC4-208ENST00000461578 TMIGD2Q96BF3 282 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms