RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 NKX6-1P78426 367 aaPredicted RBP15.04■□□□□ -0
PRPF40A-204ENST00000450303 MYBPC1Q00872 1141 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 TSPAN31Q12999 210 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 OR7A5Q15622 319 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 ZNF74Q16587 644 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 ANKDD1AQ495B1 522 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 ZER1Q7Z7L7 766 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 CCDC103Q8IW40 242 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 HS3ST5Q8IZT8 346 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 MAGEE2Q8TD90 523 aaPredicted RBP15.04■□□□□ -0
PRPF40A-204ENST00000450303 LIPHQ8WWY8 451 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 FEVQ99581 238 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 HDHD5Q9BXW7 423 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 YTHDF1Q9BYJ9 559 aaKnown RBP15.04■□□□□ -0
PRPF40A-204ENST00000450303 C20orf141Q9NUB4 165 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 ENOPH1Q9UHY7 261 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 ZNF229Q9UJW7 825 aa15.04■□□□□ -0
PRPF40A-204ENST00000450303 UNC119BA6NIH7 251 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 LIPT2A6NK58 231 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF724A8MTY0 619 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 LYZL6O75951 148 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 OR6A2O95222 327 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 IGHV3-9P01782 118 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 BGLAPP02818 100 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 IMPDH2P12268 514 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 CDH2P19022 906 aaPredicted RBP15.03■□□□□ -0
PRPF40A-204ENST00000450303 CBLP22681 906 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 FPR3P25089 353 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 HOXC12P31275 282 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 GPR4P46093 362 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 GSSP48637 474 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 NR1H2P55055 460 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ITGADQ13349 1161 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 TAB1Q15750 504 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 RFX4Q33E94 735 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 SLC36A3Q495N2 470 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 KCTD21Q4G0X4 260 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 TTC23Q5W5X9 447 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ABLIM2Q6H8Q1 611 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF770Q6IQ21 691 aaPredicted RBP15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF704Q6ZNC4 412 aaPredicted RBP15.03■□□□□ -0
PRPF40A-204ENST00000450303 BHLHA15Q7RTS1 189 aaPredicted RBP15.03■□□□□ -0
PRPF40A-204ENST00000450303 GALNT5Q7Z7M9 940 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 OAFQ86UD1 273 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 KRTAP1-3Q8IUG1 177 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF100Q8IYN0 542 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF555Q8NEP9 628 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 TSPAN14Q8NG11 270 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 KISS1RQ969F8 398 aaPredicted RBP15.03■□□□□ -0
PRPF40A-204ENST00000450303 CCL19Q99731 98 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 PTDSS2Q9BVG9 487 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 OR10A4Q9H209 315 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 POFUT2Q9Y2G5 429 aa15.03■□□□□ -0
PRPF40A-204ENST00000450303 ZNF716A6NP11 495 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 SMPD2O60906 423 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 SMIM18P0DKX4 95 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 MAKP20794 623 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 RAD23AP54725 363 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 RIPPLY3P57055 190 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 IL1RL1Q01638 556 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 PMS2P3Q13401 168 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 RPL13AP3Q6NVV1 102 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 FAHD1Q6P587 224 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 Q6ZT83 130 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 NANOGNBQ7Z5D8 188 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 SCAIQ8N9R8 606 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 OR5J2Q8NH18 312 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 PIGTQ969N2 578 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 GTPBP3Q969Y2 492 aaKnown RBP15.02■□□□□ -0
PRPF40A-204ENST00000450303 TSC22D3Q99576 134 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 GSX1Q9H4S2 264 aaPredicted RBP15.02■□□□□ -0
PRPF40A-204ENST00000450303 PAPOLBQ9NRJ5 636 aaKnown RBP15.02■□□□□ -0
PRPF40A-204ENST00000450303 KRT84Q9NSB2 600 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 USE1Q9NZ43 259 aa15.02■□□□□ -0
PRPF40A-204ENST00000450303 NOSIPQ9Y314 301 aaKnown RBP15.02■□□□□ -0
PRPF40A-204ENST00000450303 MAGED1Q9Y5V3 778 aaPredicted RBP15.02■□□□□ -0
PRPF40A-204ENST00000450303 ARID1AO14497 2285 aa15.02□□□□□ -0.01
PRPF40A-204ENST00000450303 MTORP42345 2549 aa15.02□□□□□ -0.01
PRPF40A-204ENST00000450303 SETD2Q9BYW2 2564 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 C2CD3Q4AC94 2353 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 A0A087WXM4 84 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 FTCDNL1E5RQL4 147 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 IGHV1-2P23083 117 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 GRPRP30550 384 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 NTF4P34130 210 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 DAPP51397 102 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 TUBA4AP68366 448 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 LSM11P83369 360 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 LTBQ06643 244 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 P2RY6Q15077 328 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 STK11Q15831 433 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 ZBED5Q49AG3 693 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 PAQR6Q6TCH4 344 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 CD300LDQ6UXZ3 194 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 H1FNTQ75WM6 255 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 SLC46A3Q7Z3Q1 461 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 UBE2J2Q8N2K1 259 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 HSD17B8Q92506 261 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 MOGAT1Q96PD6 335 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 NIPSNAP1Q9BPW8 284 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms