RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 LIMS1P48059 325 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 HMGA2P52926 109 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 IST1P53990 364 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 PRPS1P60891 318 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 RPL27P61353 136 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 ARMC4Q5T2S8 1044 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 OR2T5Q6IEZ7 315 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 ANKRD16Q6P6B7 361 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 P2RY8Q86VZ1 359 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 OR9Q2Q8NGE9 314 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 OR4C15Q8NGM1 316 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 OR2T29Q8NH02 315 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 HDAC2Q92769 488 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 RSRC1Q96IZ7 334 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 TSPAN32Q96QS1 320 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 KATNB1Q9BVA0 655 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 TXNIPQ9H3M7 391 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 UBTD1Q9HAC8 227 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 SAMHD1Q9Y3Z3 626 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 HRNRQ86YZ3 2850 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 PDZD2O15018 2839 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 TCRBV3S1A0A5B6 114 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 H7C1C5 153 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 EBAG9O00559 213 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 GNGT2O14610 69 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 ARHGEF9O43307 516 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 CST1P01037 141 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 GASTP01350 101 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 IGHG1P01857 330 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 PATE4P0C8F1 98 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
SNHG4-201ENST00000448190 UBE2NP61088 152 aaKnown RBP11.69□□□□□ -0.54
SNHG4-201ENST00000448190 LCN6P62502 163 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 PIGFQ07326 219 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 NCMAPQ5T1S8 102 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 PGBD2Q6P3X8 592 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 KLHL24Q6TFL4 600 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
SNHG4-201ENST00000448190 GNPDA2Q8TDQ7 276 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 NSMAFQ92636 917 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 MCHR2Q969V1 340 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 Q96M85 177 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 MRPL13Q9BYD1 178 aaKnown RBP11.69□□□□□ -0.54
SNHG4-201ENST00000448190 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 REEP1Q9H902 201 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 SIGLEC7Q9Y286 467 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 PLEKHA6Q9Y2H5 1048 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 IER3IP1Q9Y5U9 82 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 CACNA1DQ01668 2161 aa11.69□□□□□ -0.54
SNHG4-201ENST00000448190 MAST4O15021 2626 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 MPDZO75970 2070 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 IGKV1D-43A0A0B4J1Z2 117 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 DHHO43323 396 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 FKBP6O75344 327 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CCNB2O95067 398 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 NDUFB2O95178 105 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 SLC2A10O95528 541 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 HLA-HP01893 362 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CD3EP07766 207 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CD14P08571 375 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 IGFBP1P08833 259 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CD79AP11912 226 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 B4GALT1P15291 398 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 HOXC12P31275 282 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CDAP32320 146 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 IFNGR2P38484 337 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 FMODQ06828 376 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 DBPQ10586 325 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 C1orf146Q5VVC0 180 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ADAM5Q6NVV9 412 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ZNF704Q6ZNC4 412 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ASRGL1Q7L266 308 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 TMEM179BQ7Z7N9 219 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 CDH24Q86UP0 819 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 PIAS4Q8N2W9 510 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 GTPBP3Q969Y2 492 aaKnown RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 RASD2Q96D21 266 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 SAMD8Q96LT4 415 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 SH3GL3Q99963 347 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ESRP2Q9H6T0 727 aaKnown RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 KRCC1Q9NPI7 259 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
SNHG4-201ENST00000448190 GRHPRQ9UBQ7 328 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 FREM1Q5H8C1 2179 aa11.68□□□□□ -0.54
SNHG4-201ENST00000448190 TEX13CA0A0J9YWL9 993 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms