RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 C1orf210Q8IVY1 113 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ZNF417Q8TAU3 575 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 TRIM63Q969Q1 353 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 DERL3Q96Q80 235 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ZNF587Q96SQ5 575 aaPredicted RBP18.25■□□□□ 0.51
VSX1-202ENST00000376709 TXNIPQ9H3M7 391 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 SPATA2Q9UM82 520 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ZDBF2Q9HCK1 2354 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 A0A087WV48 116 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ADAM10O14672 748 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ITGA10O75578 1167 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 DXOO77932 396 aaKnown RBP18.25■□□□□ 0.51
VSX1-202ENST00000376709 ABHD16AO95870 558 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 FAM157BP0CG42 384 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 TFPIP10646 304 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 EGR3Q06889 387 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ZNF519Q8TB69 540 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 LGALS14Q8TCE9 139 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 SLC7A6Q92536 515 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 NSMAFQ92636 917 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 MAP6Q96JE9 813 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 CRB3Q9BUF7 120 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 APMAPQ9HDC9 416 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 MRPS7Q9Y2R9 242 aaKnown RBP18.25■□□□□ 0.51
VSX1-202ENST00000376709 FKBP7Q9Y680 259 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ANKUB1A6NFN9 424 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 PLPP3O14495 311 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 PHYHO14832 338 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 SF3B4Q15427 424 aaKnown RBP eCLIP18.24■□□□□ 0.51
VSX1-202ENST00000376709 Q499Y3 187 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 KRT74Q7RTS7 529 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 ST8SIA1Q92185 356 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 UPRTQ96BW1 309 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 FOXN4Q96NZ1 517 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 ABCG5Q9H222 651 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 ING1Q9UK53 422 aaPredicted RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 PPIEQ9UNP9 301 aaKnown RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 B9D1Q9UPM9 204 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 SLC16A7O60669 478 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 UBL3O95164 117 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 MAPK3P27361 379 aaPredicted RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 PITPNAQ00169 270 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 IFITM2Q01629 132 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 ZFP69Q49AA0 526 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 HES5Q5TA89 166 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 CPEB2Q7Z5Q1 589 aaKnown RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 OR5L2Q8NGL0 311 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 OTOSQ8NHW6 89 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 C8orf44Q96CB5 159 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 ZFP3Q96NJ6 502 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 NECAB3Q96P71 396 aaPredicted RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 WDR77Q9BQA1 342 aaPredicted RBP18.24■□□□□ 0.51
VSX1-202ENST00000376709 BEX2Q9BXY8 128 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 KLRF1Q9NZS2 232 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 MED11Q9P086 117 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 KCNG2Q9UJ96 466 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 VDAC3Q9Y277 283 aa18.24■□□□□ 0.51
VSX1-202ENST00000376709 IFITM5A6NNB3 132 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 CLDN20P56880 219 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 GPR176Q14439 515 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 UBE2NLQ5JXB2 153 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 ZNF385CQ66K41 422 aaPredicted RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 ESPNLQ6ZVH7 1005 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 IFI44Q8TCB0 444 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 COMMD4Q9H0A8 199 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 SLITRK2Q9H156 845 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 TP63Q9H3D4 680 aaPredicted RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 TCF7L1Q9HCS4 588 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 MRPL39Q9NYK5 338 aaKnown RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 CACNA1CQ13936 2221 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 CPAMD8Q8IZJ3 1885 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 VSTM2BA6NLU5 285 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 AIPO00170 330 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 ZNF593O00488 134 aaPredicted RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 ORC5O43913 435 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 SLC43A1O75387 559 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 RCVRNP35243 200 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 SOX2P48431 317 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 MELKQ14680 651 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 PEAR1Q5VY43 1037 aaPredicted RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 OTPQ5XKR4 325 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 LRRC69Q6ZNQ3 347 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 ZNF676Q8N7Q3 588 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 ZNF248Q8NDW4 579 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 HGDQ93099 445 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 NXPE2Q96DL1 559 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 SNX18Q96RF0 628 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 SPSB2Q99619 263 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 NPAS1Q99742 590 aa18.23■□□□□ 0.51
VSX1-202ENST00000376709 RANGRFQ9HD47 186 aaPredicted RBP18.23■□□□□ 0.51
VSX1-202ENST00000376709 TECTAO75443 2155 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 A0A1B0GTH9 108 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 TMEM200CA6NKL6 621 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 GSTT2P0CG29 244 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 GSTT2BP0CG30 244 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 CCKBRP32239 447 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 INSM1Q01101 510 aaPredicted RBP18.22■□□□□ 0.51
VSX1-202ENST00000376709 RNASE12Q5GAN4 147 aaKnown RBP18.22■□□□□ 0.51
VSX1-202ENST00000376709 BICRALQ6AI39 1079 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms