RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 NPFFR2Q9Y5X5 522 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 CPAMD8Q8IZJ3 1885 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 ARPC4-TTLL3A0A0A6YYG9 625 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 A0A1W2PQ09 198 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 SHISA3A0PJX4 238 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 E9PI62 339 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 PHYHO14832 338 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 TRIM3O75382 744 aaPredicted RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 BGLAPP02818 100 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 HEXBP07686 556 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 TACSTD2P09758 323 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 AZGP1P25311 298 aaKnown RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 GDI2P50395 445 aaKnown RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 RNF4P78317 190 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 DCDP81605 110 aaKnown RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 RPL18Q07020 188 aaKnown RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 BAK1Q16611 211 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 PYDC2Q56P42 97 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 ZMAT1Q5H9K5 638 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 LINC01590Q5TEZ4 76 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 CNIH2Q6PI25 160 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 SSX6Q7RTT6 188 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 GRINAQ7Z429 371 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 CEACAM19Q7Z692 300 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 ANKRD37Q7Z713 158 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 PRSS58Q8IYP2 241 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 OR6K6Q8NGW6 343 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 OR5J2Q8NH18 312 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 METTL21AQ8WXB1 218 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 TMEM234Q8WY98 164 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 KTI12Q96EK9 354 aaPredicted RBP12.71□□□□□ -0.37
LDB3-204ENST00000372066 Q96M85 177 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 SLC22A11Q9NSA0 550 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
LDB3-204ENST00000372066 NBASA2RRP1 2371 aa12.71□□□□□ -0.38
LDB3-204ENST00000372066 DOPEY2Q9Y3R5 2298 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 CLEC18AA5D8T8 446 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 A8MVM7 634 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 IDSB3KWA1 339 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 HPGDSO60760 199 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 ALOX12BO75342 701 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 SCRG1O75711 98 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 CSF3P09919 207 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 NAA10P41227 235 aaPredicted RBP12.7□□□□□ -0.38
LDB3-204ENST00000372066 CDKN2AP42771 156 aaKnown RBP12.7□□□□□ -0.38
LDB3-204ENST00000372066 BLVRAP53004 296 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 DLX5P56178 289 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 LTBQ06643 244 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 SGCBQ16585 318 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 ACSM3Q53FZ2 586 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 TRIQKQ629K1 86 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 CLEC18BQ6UXF7 455 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 LANCL3Q6ZV70 420 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 OVCH1Q7RTY7 1134 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 CLEC18CQ8NCF0 446 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 ST8SIA1Q92185 356 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 GHSRQ92847 366 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 MIB2Q96AX9 1013 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 RABL2AQ9UBK7 228 aaPredicted RBP12.7□□□□□ -0.38
LDB3-204ENST00000372066 C19orf25Q9UFG5 118 aaPredicted RBP12.7□□□□□ -0.38
LDB3-204ENST00000372066 RABL2BQ9UNT1 228 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 TMEM14AQ9Y6G1 99 aa12.7□□□□□ -0.38
LDB3-204ENST00000372066 VSTM2BA6NLU5 285 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 OR2T1O43869 369 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 PRKNO60260 465 aaPredicted RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 CPNE3O75131 537 aaKnown RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 NPIPB7O75200 414 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 NUDT14O95848 222 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SPNP16150 400 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RAB3BP20337 219 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SHC1P29353 583 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TALDO1P37837 337 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RPS5P46782 204 aaKnown RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 CAV3P56539 151 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 QPRTQ15274 297 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 FAM69AQ5T7M9 428 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SFXN4Q6P4A7 337 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 AKAP14Q86UN6 197 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 GPR119Q8TDV5 335 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 CT55Q8WUE5 264 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SLC26A1Q9H2B4 701 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RPRD1BQ9NQG5 326 aaKnown RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 GNG8Q9UK08 70 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TRBV2A0A0J9YWF9 115 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SMIM30A4D0T7 59 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ANKUB1A6NFN9 424 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms