RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MPDZO75970 2070 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 A0A1W2PNU3 283 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 TP53I11O14683 189 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 NUDT14O95848 222 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 HMGN1P05114 100 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 HTR1AP08908 422 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 PIPP12273 146 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 GNLYP22749 145 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 MRPL49Q13405 166 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 SNTA1Q13424 505 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 DNASE1L3Q13609 305 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 TUBA3CQ13748 450 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SNAPC1Q16533 368 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 ZBED5Q49AG3 693 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 TMEM81Q6P7N7 255 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SMARCD3Q6STE5 483 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 OPN5Q6U736 354 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 AHSA2Q719I0 299 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 OAFQ86UD1 273 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 MEX3DQ86XN8 651 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 IQCF1Q8N6M8 205 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 TCEANCQ8N8B7 351 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 TMEM163Q8TC26 289 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 TMEM234Q8WY98 164 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 FCGR1BQ92637 280 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 ZBTB8AQ96BR9 441 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SH3YL1Q96HL8 342 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 PLEKHA8Q96JA3 519 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 MOGAT1Q96PD6 335 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SECISBP2Q96T21 854 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 RTN4RQ9BZR6 473 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 CCDC90BQ9GZT6 254 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 PLEKHA2Q9HB19 425 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 KLRF1Q9NZS2 232 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 YARS2Q9Y2Z4 477 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 ZNF337Q9Y3M9 751 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 RPL36Q9Y3U8 105 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 KNTC1P50748 2209 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SPTAN1Q13813 2472 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 ANKUB1A6NFN9 424 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 M0R129 80 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 M0R3G1 203 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 RAD1O60671 282 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 ZNF354AO60765 605 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 PTNP21246 168 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 PCMT1P22061 227 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 OTX2P32243 289 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 GRK5P34947 590 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 SSR4P51571 173 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 EFNB1P98172 346 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 NEDD8Q15843 81 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 GAGE13Q4V321 117 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 CLEC12AQ5QGZ9 265 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 HIST2H2BCQ6DN03 193 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 ACSM5Q6NUN0 579 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 C5orf46Q6UWT4 87 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 C16orf47Q6ZP98 133 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 RAB43Q86YS6 212 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 LIPHQ8WWY8 451 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 DGCR14Q96DF8 476 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 KTI12Q96EK9 354 aaPredicted RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 SIGLEC11Q96RL6 698 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 IL4I1Q96RQ9 567 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 NDEL1Q9GZM8 345 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 RBM38Q9H0Z9 239 aaKnown RBP7.87□□□□□ -1.15
TPM3-213ENST00000368545 UBQLN3Q9H347 655 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 METTL7AQ9H8H3 244 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 ZNF160Q9HCG1 818 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 PIEZO2Q9H5I5 2752 aa7.87□□□□□ -1.15
TPM3-213ENST00000368545 IGLV3-32A0A0A0MS00 114 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 IRGMA1A4Y4 181 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 BHLHE40O14503 412 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 SURF4O15260 269 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 TLX2O43763 284 aaPredicted RBP7.86□□□□□ -1.15
TPM3-213ENST00000368545 PRKYO43930 277 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 OR7A10O76100 309 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 CLDN1O95832 211 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 CDK1P06493 297 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 TACR3P29371 465 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 DLSTP36957 453 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 POLR2HP52434 150 aaKnown RBP7.86□□□□□ -1.15
TPM3-213ENST00000368545 ZNF134P52741 427 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 GAS1P54826 345 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 PRPS1P60891 318 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 RPS18P62269 152 aaKnown RBP7.86□□□□□ -1.15
TPM3-213ENST00000368545 CHAF1BQ13112 559 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 ZNF791Q3KP31 576 aaPredicted RBP7.86□□□□□ -1.15
TPM3-213ENST00000368545 ANKDD1AQ495B1 522 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 RTL4Q6ZR62 310 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 GRINAQ7Z429 371 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 LNX2Q8N448 690 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 STX19Q8N4C7 294 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 OR13C2Q8NGS9 318 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 GPR119Q8TDV5 335 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 DUSP19Q8WTR2 217 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 ST8SIA1Q92185 356 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 SGCDQ92629 289 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 GGHQ92820 318 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 LRR1Q96L50 414 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms