RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 OR8J2Q8NGG1 315 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 MBNL1Q9NR56 388 aaKnown RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SH2D1BO14796 132 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 MYF6P23409 242 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CHATP28329 748 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 GIPRP48546 466 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 DPTQ07507 201 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ITPKCQ96DU7 683 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 DPCDQ9BVM2 203 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 FAM183AA6NL82 134 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 H7C1C5 153 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ARHGAP33O14559 1287 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 KLKB1P03952 638 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ECI1P42126 302 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 LCN6P62502 163 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TNK1Q13470 666 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 RTL8BQ17RB0 113 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CNIH2Q6PI25 160 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 KCNIP4Q6PIL6 250 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CATSPERDQ86XM0 798 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 MEX3DQ86XN8 651 aaKnown RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 GCNT2Q8N0V5 402 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 NKAIN3Q8N8D7 197 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 OR11G2Q8NGC1 345 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TFAP2CQ92754 450 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TRMT61AQ96FX7 289 aaKnown RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 OR52A1Q9UKL2 312 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 E9PI62 339 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 TFP02787 698 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 HOXB5P09067 269 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 TNFRSF1AP19438 455 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CD22P20273 847 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 ID4P47928 161 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 MAP2K6P52564 334 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 FAPQ12884 760 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 KCNAB1Q14722 419 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 FOXB2Q5VYV0 432 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SHEQ5VZ18 495 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 MFSD12Q6NUT3 480 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 B3GNT9Q6UX72 402 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CYP4V2Q6ZWL3 525 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-203ENST00000361654 TMEM130Q8N3G9 435 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 B3GNT7Q8NFL0 401 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SEMA4CQ9C0C4 833 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CTXN2P0C2S0 81 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 BAXQ07812 192 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SYT9Q86SS6 491 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CPNE4Q96A23 557 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-203ENST00000361654 BCO1Q9HAY6 547 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 NOX3Q9HBY0 568 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CHST11Q9NPF2 352 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 LUZP4Q9P127 313 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 TBC1D29Q9UFV1 150 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CEPT1Q9Y6K0 416 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 MYH13Q9UKX3 1938 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 GPX3P22352 226 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 PEA15Q15121 130 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 ADPRMQ3LIE5 342 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 WDR88Q6ZMY6 472 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 OR5AS1Q8N127 324 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SLC15A4Q8N697 577 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 DEFB108BQ8NET1 73 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 TM4SF18Q96CE8 201 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 FUNDC2Q9BWH2 189 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 MEIS3P1A6NDR6 274 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SULT1C2O00338 296 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SOCS6O14544 535 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
CLIP1-203ENST00000361654 EFSO43281 561 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 AKR7A3O95154 331 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 APOC3P02656 99 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 OR8U8P0C7N1 319 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 RAP2BP61225 183 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLIP1-203ENST00000361654 C9orf50Q5SZB4 431 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CAMKMTQ7Z624 323 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 CADM4Q8NFZ8 388 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 OR2T35Q8NGX2 323 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 OR56B4Q8NH76 319 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 UFSP2Q9NUQ7 469 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 PCDHGA7Q9Y5G6 932 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 GPR45Q9Y5Y3 372 aa10.08□□□□□ -0.8
CLIP1-203ENST00000361654 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 CDK5R2Q13319 367 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 CCBE1Q6UXH8 406 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-203ENST00000361654 PAQR9Q6ZVX9 377 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 DOK3Q7L591 496 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 SPRED1Q7Z699 444 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 C1orf210Q8IVY1 113 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 KLHDC8BQ8IXV7 354 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 BHLHE23Q8NDY6 225 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 FAM71CQ8NEG0 241 aa10.07□□□□□ -0.8
CLIP1-203ENST00000361654 HPSE2Q8WWQ2 592 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms