RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C2orf42Q9NWW7 574 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ICKQ9UPZ9 632 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 NPFFR2Q9Y5X5 522 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 A6NIZ1 184 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SYT7O43581 403 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SLC16A7O60669 478 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 CCR9P51686 369 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 RAP1BP61224 184 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 RAP1AP62834 184 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ARSKQ6UWY0 536 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 WDFY2Q96P53 400 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SDF2Q99470 211 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 TRIP12Q14669 1992 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 NME1P15531 152 aaKnown RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 PRKACAP17612 351 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 GABRB1P18505 474 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 METAP1P53582 386 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 Q499Y3 187 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SPIN3Q5JUX0 258 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SIRT6Q8N6T7 355 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 SLC25A44Q96H78 314 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 RBM24Q9BX46 236 aaKnown RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 NUP214P35658 2090 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 PPM1DO15297 605 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 CD79AP11912 226 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 TAS2R19P59542 299 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ARHGAP11BQ3KRB8 267 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 PLEKHN1Q494U1 663 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 OR7E24Q6IFN5 339 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 HEPHL1Q6MZM0 1159 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 ACBD4Q8NC06 268 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 RAF1P04049 648 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CCL7P80098 99 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 FXNQ16595 210 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 RPS19BP1Q86WX3 136 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 NAXDQ8IW45 347 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 OR52I2Q8NH67 350 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 DVL3Q92997 716 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 FAM86C1Q9NVL1 165 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PCDHB10Q9UN67 800 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 KLF13Q9Y2Y9 288 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 LILRA5A6NI73 299 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 KDM4EB2RXH2 506 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CHP2O43745 196 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 HMGA2P52926 109 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 AGERQ15109 404 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CMC2Q9NRP2 79 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 OR4Q3Q8NH05 313 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CDCP1Q9H5V8 836 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PAPLNO95428 1278 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 UBBP0CG47 229 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 UBCP0CG48 685 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 TSFMP43897 325 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CXADRP78310 365 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 SLC25A35Q3KQZ1 300 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 VASNQ6EMK4 673 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF611Q8N823 705 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 OR5H2Q8NGV7 314 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 TMEM106AQ96A25 262 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CNRIP1Q96F85 164 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 SLC46A1Q96NT5 459 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PIGQQ9BRB3 760 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 TMEM184BQ9Y519 407 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CTNSO60931 367 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 SCO1O75880 301 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 HLA-AP01891 365 aaKnown RBP11.3□□□□□ -0.6
COLCA1-201ENST00000355430 CDK5Q00535 292 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 DPY19L2P2Q6ZN68 376 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 BORCS8Q96FH0 119 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 ST6GAL2Q96JF0 529 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 V9GYH0 126 aa11.3□□□□□ -0.6
COLCA1-201ENST00000355430 PLSCR5A0PG75 271 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 SERINC4A6NH21 518 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PRICKLE3O43900 615 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 DOK2O60496 412 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 MRPL33O75394 65 aaKnown RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms