RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZNF454Q8N9F8 522 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 DEFB124Q8NES8 71 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 FNDC8Q8TC99 324 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 ADAMTS14Q8WXS8 1223 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 OXGR1Q96P68 337 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 INTS14Q96SY0 518 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 TBX5Q99593 518 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 ZCCHC4Q9H5U6 513 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 EXOSC4Q9NPD3 245 aaKnown RBP15.43■□□□□ 0.06
VPS13B-201ENST00000355155 RASD1Q9Y272 281 aa15.43■□□□□ 0.06
VPS13B-201ENST00000355155 C11orf98E9PRG8 122 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 J3QLW9 94 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 NCOR1O75376 2440 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 UPK3AO75631 287 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 GATBO75879 557 aaKnown RBP15.42■□□□□ 0.06
VPS13B-201ENST00000355155 P04436 131 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 ZNF19P17023 458 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 PPP5CP53041 499 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 CCDC157Q569K6 752 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 DCAF10Q5QP82 559 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 SLC35D2Q76EJ3 337 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 TPRA1Q86W33 373 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 OTOSQ8NHW6 89 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 ADAD1Q96M93 576 aaKnown RBP15.42■□□□□ 0.06
VPS13B-201ENST00000355155 ASCL3Q9NQ33 180 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 KLHL9Q9P2J3 617 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 UGT2A1Q9Y4X1 527 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 TRAV1-2A0A0B4J238 106 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 LINC01387J3KSC0 135 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 TACSTD2P09758 323 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 OR6K6Q8NGW6 343 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 FER1L6-AS2Q96M78 137 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 TSSK2Q96PF2 358 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 DCLRE1CQ96SD1 692 aaKnown RBP15.42■□□□□ 0.06
VPS13B-201ENST00000355155 PIGQQ9BRB3 760 aa15.42■□□□□ 0.06
VPS13B-201ENST00000355155 PRR32B1ATL7 298 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 TRAF3IP2O43734 574 aaPredicted RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 CDRT1O95170 752 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 HLA-DOBP13765 273 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 NAA10P41227 235 aaPredicted RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 AGFG1P52594 562 aaKnown RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 BEST3Q8N1M1 668 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 ZFP41Q8N8Y5 198 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 OR51L1Q8NGJ5 315 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 OR6X1Q8NH79 312 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 ABHD4Q8TB40 342 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 SMURF1Q9HCE7 757 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 MRPL22Q9NWU5 206 aaKnown RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 GJE1A6NN92 205 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 SHISA8B8ZZ34 492 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 EIF1BO60739 113 aaKnown RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 AQP8O94778 261 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 AKR7A3O95154 331 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 CYB561P49447 251 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 RPS11P62280 158 aaKnown RBP eCLIP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 MDGA2Q7Z553 956 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 ZNF511Q8NB15 262 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 RNF32Q9H0A6 362 aa15.41■□□□□ 0.06
VPS13B-201ENST00000355155 MRM2Q9UI43 246 aaKnown RBP15.41■□□□□ 0.06
VPS13B-201ENST00000355155 DMDP11532 3685 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 NPIPA5E9PKD4 350 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 ZNF12P17014 697 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 SHC1P29353 583 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 FOXO1Q12778 655 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 B3GNTL1Q67FW5 361 aaPredicted RBP15.4■□□□□ 0.06
VPS13B-201ENST00000355155 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 SNX33Q8WV41 574 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 THOC3Q96J01 351 aaKnown RBP15.4■□□□□ 0.06
VPS13B-201ENST00000355155 SRA1Q9HD15 236 aaKnown RBP15.4■□□□□ 0.06
VPS13B-201ENST00000355155 TEKT2Q9UIF3 430 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 NPIPA1Q9UND3 350 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 KLHDC2Q9Y2U9 406 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 OR2M5A3KFT3 312 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 VAMP5O95183 116 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 TFPIP10646 304 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 IFNGR1P15260 489 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 CTLA4P16410 223 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 SDC2P34741 201 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 HCCSP53701 268 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 RUNX1T1Q06455 604 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 INAQ16352 499 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 KCNMB1Q16558 191 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 HYAL4Q2M3T9 481 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 AP3S1Q92572 193 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 UBL7Q96S82 380 aaPredicted RBP15.4■□□□□ 0.06
VPS13B-201ENST00000355155 TMED9Q9BVK6 235 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 GALNT8Q9NY28 637 aa15.4■□□□□ 0.06
VPS13B-201ENST00000355155 LRRTM2O43300 516 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 AHCYP23526 432 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 SUCLG1P53597 346 aaKnown RBP15.39■□□□□ 0.06
VPS13B-201ENST00000355155 GABREP78334 506 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 TP53I3Q53FA7 332 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 SLC26A10Q8NG04 563 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 TMEM203Q969S6 136 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 MAP6Q96JE9 813 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 LRFN3Q9BTN0 628 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 DKKL1Q9UK85 242 aa15.39■□□□□ 0.06
VPS13B-201ENST00000355155 PNMA8CA0A1B0GUJ8 204 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 H7C1C5 153 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 MASP2O00187 686 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms