RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 U3KQ87 197 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 CFAP54Q96N23 3096 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 SULT1A3P0DMM9 295 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 SULT1A4P0DMN0 295 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 GABRA4P48169 554 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 NSDHLQ15738 373 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 DND1Q8IYX4 353 aaKnown RBP15.78■□□□□ 0.12
COL9A1-201ENST00000320755 PHYHIPQ92561 330 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 C7orf50Q9BRJ6 194 aaKnown RBP15.78■□□□□ 0.12
COL9A1-201ENST00000320755 MOKQ9UQ07 419 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 FREM3P0C091 2139 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 XKRYO14609 159 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 SLC25A1P53007 311 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 ETFDHQ16134 617 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 ISXQ2M1V0 245 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 LINC00303Q3SY05 128 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 MAMSTRQ6ZN01 415 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 CDC20BQ86Y33 519 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 SMRP1Q8NCR6 262 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 OR51D1Q8NGF3 324 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 FAM174AQ8TBP5 190 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 ADAMTS18Q8TE60 1221 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 METTL21AQ8WXB1 218 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 CCDC74AQ96AQ1 378 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 KLHL15Q96M94 604 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 INTS14Q96SY0 518 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 ACTR6Q9GZN1 396 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 COMMD4Q9H0A8 199 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 AKAP7Q9P0M2 348 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-201ENST00000320755 SLC22A13Q9Y226 551 aa15.78■□□□□ 0.12
COL9A1-201ENST00000320755 MEIKINA0A087WXM9 373 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 CTDSPLO15194 276 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 CDC40O60508 579 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL9A1-201ENST00000320755 SLC25A12O75746 678 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 CCKBRP32239 447 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 FASLGP48023 281 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 BLVRAP53004 296 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 NLRC3Q7RTR2 1065 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 GKN2Q86XP6 184 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 GPR137Q96N19 417 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 TBL1XR1Q9BZK7 514 aa15.77■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF436Q9C0F3 470 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-201ENST00000320755 PPIEQ9UNP9 301 aaKnown RBP15.77■□□□□ 0.12
COL9A1-201ENST00000320755 C2orf72A6NCS6 295 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 OR4C45A6NMZ5 311 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 RHPN2P1A8MT19 583 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 RAF1P04049 648 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 CD1AP06126 327 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 ALOX5APP20292 161 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 CD38P28907 300 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 P2RX3P56373 397 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 TAS2R20P59543 309 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 MEP1BQ16820 701 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 TCTE1Q5JU00 501 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 FTMTQ8N4E7 242 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 SLC46A1Q96NT5 459 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 TRAF4Q9BUZ4 470 aaPredicted RBP15.77■□□□□ 0.11
COL9A1-201ENST00000320755 ELOVL3Q9HB03 270 aa15.77■□□□□ 0.11
COL9A1-201ENST00000320755 TNFRSF10AO00220 468 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 SLC22A5O76082 557 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 OR6A2O95222 327 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 ABHD16AO95870 558 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 SPARCP09486 303 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 EFNB2P52799 333 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 OR1D5P58170 312 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 AP3S2P59780 193 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 CBFBQ13951 182 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 C16orf47Q6ZP98 133 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 KCTD20Q7Z5Y7 419 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 PRSS35Q8N3Z0 413 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MEIOBQ8N635 442 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 OR11A1Q9GZK7 315 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 TLCD2A6NGC4 264 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 SLC16A7O60669 478 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MAPK3P27361 379 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 EFNA3P52797 238 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 OC90Q02509 493 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 FAM69AQ5T7M9 428 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 FGD2Q7Z6J4 655 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 ELMOD2Q8IZ81 293 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MIB2Q96AX9 1013 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 HAVCR1Q96D42 359 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 WDR89Q96FK6 387 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MGAT4CQ9UBM8 478 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 PCDHGA5Q9Y5G8 931 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 BLACEA4D250 179 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 ECDO95905 644 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 SQSTM1Q13501 440 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MDGA2Q7Z553 956 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 FAM109AQ8N4B1 249 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 OR52B4Q8NGK2 314 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 THAP3Q8WTV1 239 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 GPR27Q9NS67 375 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 TAS2R5Q9NYW4 299 aa15.76■□□□□ 0.11
COL9A1-201ENST00000320755 MYEF2Q9P2K5 600 aaKnown RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 CDV3Q9UKY7 258 aaKnown RBP15.76■□□□□ 0.11
COL9A1-201ENST00000320755 H0YIG0 161 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 DDAH2O95865 285 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 HRGP04196 525 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms