RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SMIM19Q96E16 107 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 SEC22AQ96IW7 307 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 METTL9Q9H1A3 318 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 RAE1P78406 368 aaKnown RBP17.75■□□□□ 0.43
TSR1-201ENST00000301364 OR52I2Q8NH67 350 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 ARPC5LQ9BPX5 153 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 SLC19A3Q9BZV2 496 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 LUZP4Q9P127 313 aa17.75■□□□□ 0.43
TSR1-201ENST00000301364 OPN1LWP04000 364 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 DGCR2P98153 550 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 SELENBP1Q13228 472 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 LHX8Q68G74 356 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 MEX3BQ6ZN04 569 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 BBS1Q8NFJ9 593 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 OR52A1Q9UKL2 312 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 AIPO00170 330 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 RAC2P15153 192 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 RACK1P63244 317 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 HEPHL1Q6MZM0 1159 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 SCARB1Q8WTV0 552 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 NXF5Q9H1B4 397 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 A4GNTQ9UNA3 340 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 TMEM200CA6NKL6 621 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 TMEM127O75204 238 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 CNOT4O95628 575 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 HOXC8P31273 242 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 CTHP32929 405 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 LBX1P52954 281 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 TMEM176BQ3YBM2 270 aaPredicted RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 TMEM31Q5JXX7 168 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 EXOSC6Q5RKV6 272 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 C1orf140Q5VVS0 124 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 RAB11FIP2Q7L804 512 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 ALG14Q96F25 216 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 CMSS1Q9BQ75 279 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 SMCHD1A6NHR9 2005 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 A0A0A6YYD5 115 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 EEF1A1P68104 462 aaKnown RBP17.74■□□□□ 0.43
TSR1-201ENST00000301364 GRINAQ7Z429 371 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 OR1S1Q8NH92 325 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 SLC38A1Q9H2H9 487 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 HRH4Q9H3N8 390 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 SCPEP1Q9HB40 452 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 ATPIF1Q9UII2 106 aa17.74■□□□□ 0.43
TSR1-201ENST00000301364 RPL27P61353 136 aaKnown RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 CDK5R1Q15078 307 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 PGAP1Q75T13 922 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 ANKRD53Q8N9V6 530 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 BAHD1Q8TBE0 780 aaPredicted RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 PCNPQ8WW12 178 aaKnown RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 DCBLD2Q96PD2 775 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 SLC25A31Q9H0C2 315 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 PCMT1P22061 227 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 EID2BQ96D98 161 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 RSPRY1Q96DX4 576 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 ELF4Q99607 663 aaPredicted RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 OLFM2O95897 454 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 SDHAP31040 664 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 CCR2P41597 374 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 ASTLQ6HA08 431 aaPredicted RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 BTLAQ7Z6A9 289 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 ELSPBP1Q96BH3 223 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 DDOQ99489 341 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 C1orf123Q9NWV4 160 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 KIF13BQ9NQT8 1826 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 K7EPK0 472 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 P2RY10O00398 339 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 FGF9P31371 208 aaPredicted RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 ZNF93P35789 620 aaPredicted RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 BIDP55957 195 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 SLC35A1P78382 337 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 FAM71E2Q8N5Q1 922 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 PLPP7Q8NBV4 271 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 PXT1Q8NFP0 134 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 TEX101Q9BY14 249 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 SLC6A17Q9H1V8 727 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 ZNF286AQ9HBT8 521 aa17.73■□□□□ 0.43
TSR1-201ENST00000301364 DHCR7Q9UBM7 475 aaKnown RBP17.73■□□□□ 0.43
TSR1-201ENST00000301364 CHRM2P08172 466 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 SRYQ05066 204 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 ELAVL1Q15717 326 aaKnown RBP17.72■□□□□ 0.43
TSR1-201ENST00000301364 MFSD4AQ8N468 514 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 COL5A3P25940 1745 aaPredicted RBP17.72■□□□□ 0.43
TSR1-201ENST00000301364 POM121BA6NF01 834 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 YY2O15391 372 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 ICMTO60725 284 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 SOD1P00441 154 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 GABRB1P18505 474 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 SOX18P35713 384 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 SMAD2Q15796 467 aaKnown RBP17.72■□□□□ 0.43
TSR1-201ENST00000301364 MKXQ8IYA7 352 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 TCEAL3Q969E4 200 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 WDR34Q96EX3 536 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 TTC3P53804 2025 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 A0A1W2PS29 197 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 A6NL46 340 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 WDPCPO95876 746 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 LPLP06858 475 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms