RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 IDH3BO43837 385 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 DSCAMO60469 2012 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 MRPS14O60783 128 aaKnown RBP18.7■□□□□ 0.58
SMCO4-201ENST00000298966 IGFBP1P08833 259 aaPredicted RBP18.7■□□□□ 0.58
SMCO4-201ENST00000298966 ASAH2BP0C7U1 165 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 HK1P19367 917 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 PCYT1AP49585 367 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 TOMM20Q15388 145 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 PGGHGQ32M88 737 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 TMEM236Q5W0B7 351 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 ZNF773Q6PK81 442 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 PTCHD4Q6ZW05 846 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 LNX2Q8N448 690 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 C10orf53Q8N6V4 93 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 C9orf106Q8NAJ2 232 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 OR13C2Q8NGS9 318 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 MFSD8Q8NHS3 518 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 APH1BQ8WW43 257 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 PERPQ96FX8 193 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 GPX7Q96SL4 187 aaPredicted RBP18.7■□□□□ 0.58
SMCO4-201ENST00000298966 PIGQQ9BRB3 760 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 TPRKBQ9Y3C4 175 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 CHD3Q12873 2000 aaKnown RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 GJE1A6NN92 205 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 BGLAPP02818 100 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 TSPAN19P0C672 248 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 APEHP13798 732 aaKnown RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 RPL5P46777 297 aaKnown RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 NR1H2P55055 460 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 TMEM201Q5SNT2 666 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 DPY19L2P2Q6ZN68 376 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 MEX3DQ86XN8 651 aaKnown RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 SCAIQ8N9R8 606 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 OR8D4Q8NGM9 314 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 POC1BQ8TC44 478 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 ABTB1Q969K4 478 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 PLEKHA8Q96JA3 519 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 SAMD8Q96LT4 415 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 ZFP3Q96NJ6 502 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 CCL19Q99731 98 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 SFXN3Q9BWM7 321 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 TAPBPLQ9BX59 468 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 ASPNQ9BXN1 380 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 PLA2G12AQ9BZM1 189 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 OR2B2Q9GZK3 357 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 UBQLN3Q9H347 655 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 FN3KQ9H479 309 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 CCNB1IP1Q9NPC3 277 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 CLN6Q9NWW5 311 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 HDGFL3Q9Y3E1 203 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 MED12Q93074 2177 aa18.69■□□□□ 0.58
SMCO4-201ENST00000298966 SONP18583 2426 aaKnown RBP18.69■□□□□ 0.58
SMCO4-201ENST00000298966 TFAP2AP05549 437 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 FMO3P31513 532 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 FOXF2Q12947 444 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 SGCBQ16585 318 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 OCLNQ16625 522 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 SYT14P1Q58G82 188 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 NANOGNBQ7Z5D8 188 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 BPIFB6Q8NFQ5 453 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 OR51A7Q8NH64 312 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 ZPLD1Q8TCW7 415 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 IPCEF1Q8WWN9 437 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-201ENST00000298966 UBE2FQ969M7 185 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 TAAR8Q969N4 342 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 KTI12Q96EK9 354 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-201ENST00000298966 GNRHR2Q96P88 292 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 TNFRSF13CQ96RJ3 184 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 PTDSS2Q9BVG9 487 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 DUSP21Q9H596 190 aa18.68■□□□□ 0.58
SMCO4-201ENST00000298966 BHLHE40O14503 412 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 IMPA2O14732 288 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 ARPC3O15145 178 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 SMNDC1O75940 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMCO4-201ENST00000298966 IFNGP01579 166 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 ATP6V1B1P15313 513 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 CCNA2P20248 432 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 GTF2E2P29084 291 aaKnown RBP18.67■□□□□ 0.58
SMCO4-201ENST00000298966 IDUAP35475 653 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 RPS5P46782 204 aaKnown RBP18.67■□□□□ 0.58
SMCO4-201ENST00000298966 CDH15P55291 814 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 SNAPC1Q16533 368 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 ACKR1Q16570 336 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 ACSM5Q6NUN0 579 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 CCDC103Q8IW40 242 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 OR5J2Q8NH18 312 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 TMEM163Q8TC26 289 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 TM9SF2Q99805 663 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 IFT27Q9BW83 186 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 UBTD1Q9HAC8 227 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 MRPL39Q9NYK5 338 aaKnown RBP18.67■□□□□ 0.58
SMCO4-201ENST00000298966 TVP23BQ9NYZ1 205 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 TRAPPC4Q9Y296 219 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 MED12LQ86YW9 2145 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 NBEAL1Q6ZS30 2694 aa18.67■□□□□ 0.58
SMCO4-201ENST00000298966 TRAV27A0A087WT01 109 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 DPPA5A6NC42 116 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 ZIC3O60481 467 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 FAM20BO75063 409 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 PEPDP12955 493 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms