RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KRT8P05787 483 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 CLDN12P56749 244 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PEAR1Q5VY43 1037 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 GPR139Q6DWJ6 353 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MTFR2Q6P444 385 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 GLCCI1Q86VQ1 547 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MINDY2Q8NBR6 621 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 OR4M2Q8NGB6 313 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 OR5H6Q8NGV6 325 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 OIT3Q8WWZ8 545 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 NSMAFQ92636 917 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PPP1R14AQ96A00 147 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 SPACA9Q96E40 222 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 CMKLR1Q99788 373 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 SP140LQ9H930 580 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 WIF1Q9Y5W5 379 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 HS3ST3B1Q9Y662 390 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MUC6Q6W4X9 2439 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 EFNA2O43921 213 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 MT-ATP6P00846 226 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 EIF4EP06730 217 aaKnown RBP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 APEHP13798 732 aaKnown RBP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 SLC25A1P53007 311 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 RPS11P62280 158 aaKnown RBP eCLIP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 PUDPQ08623 228 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 ISXQ2M1V0 245 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 TRIQKQ629K1 86 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 HBMQ6B0K9 141 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 XKRXQ6PP77 449 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 OR4K17Q8NGC6 315 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 TRMT10AQ8TBZ6 339 aaKnown RBP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 BRD7Q9NPI1 651 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 CPAMD8Q8IZJ3 1885 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 CASP3P42574 277 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 TPTEP56180 551 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 ADAM8P78325 824 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 SCN1BQ07699 218 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 TOMM20Q15388 145 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 HES5Q5TA89 166 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 EEF1A1P5Q5VTE0 462 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 OR10AC1Q8NH08 325 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 SLC39A7Q92504 469 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 OR5B2Q96R09 309 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 CDCP1Q9H5V8 836 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 B9D1Q9UPM9 204 aa16.15■□□□□ 0.18
CAPN1-201ENST00000279247 COA3Q9Y2R0 106 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-201ENST00000279247 NPIPA5E9PKD4 350 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 OGG1O15527 345 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 OR2T1O43869 369 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 EIF1AXP47813 144 aaKnown RBP16.14■□□□□ 0.17
CAPN1-201ENST00000279247 INPP1P49441 399 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 EVX1P49640 407 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 IL10RAQ13651 578 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 AGAP7PQ5VUJ5 663 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 ASB18Q6ZVZ8 466 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 NUP54Q7Z3B4 507 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 MISPQ8IVT2 679 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 IZUMO1Q8IYV9 350 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF671Q8TAW3 534 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 DERL3Q96Q80 235 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 SLCO1C1Q9NYB5 712 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 NPIPA1Q9UND3 350 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 MOKQ9UQ07 419 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 EIF2B2P49770 351 aaKnown RBP16.14■□□□□ 0.17
CAPN1-201ENST00000279247 HSD17B12Q53GQ0 312 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 LINC00346Q8IVM7 164 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 TMEM156Q8N614 296 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 GNRHR2Q96P88 292 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 UBL7Q96S82 380 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-201ENST00000279247 HDHD2Q9H0R4 259 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 C11orf54Q9H0W9 315 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-201ENST00000279247 TXNIPQ9H3M7 391 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 FAM86C1Q9NVL1 165 aa16.14■□□□□ 0.17
CAPN1-201ENST00000279247 FLRT2O43155 660 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 DXOO77932 396 aaKnown RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 STK17BO94768 372 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 TXNDC12O95881 172 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 WNT11O96014 354 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 IMPDH2P12268 514 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ATF1P18846 271 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 TCN2P20062 427 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 SDHBP21912 280 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 CARD17Q5XLA6 110 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF57Q68EA5 555 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 OR7E24Q6IFN5 339 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 LYPD8Q6UX82 237 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 C19orf18Q8NEA5 215 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 OR4M1Q8NGD0 313 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 OR51A4Q8NGJ6 313 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 KLHL15Q96M94 604 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 WACQ9BTA9 647 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 SLC26A1Q9H2B4 701 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 LOXL2Q9Y4K0 774 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ZFHX4Q86UP3 3567 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 PRRC2CQ9Y520 2896 aaKnown RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 IGHV1-45A0A0A0MS14 117 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 HTR3EA5X5Y0 456 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms