RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TREML1Q86YW5 311 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 ANKS4BQ8N8V4 417 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 NUP37Q8NFH4 326 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 SLC25A44Q96H78 314 aaPredicted RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 ELAC2Q9BQ52 826 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 RHCGQ9UBD6 479 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 CADP27708 2225 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 A0A1W2PRG6 482 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 B9A039 149 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 MCIDASD6RGH6 385 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 CXCR6O00574 342 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 NME4O00746 187 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 RAB36O95755 333 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 ZNF682O95780 498 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
GPN3-201ENST00000228827 PGA4P0DJD7 388 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 FUT4P22083 530 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 GIPRP48546 466 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 NUDT2P50583 147 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SEC24CP53992 1094 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 CLRN1P58418 232 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 DSCR9P59020 149 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 RAB1AP62820 205 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 MYBPC1Q00872 1141 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 RUNX1T1Q06455 604 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
GPN3-201ENST00000228827 DAG1Q14118 895 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 CARTPTQ16568 116 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 ARPINQ7Z6K5 226 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SVOPLQ8N434 492 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 MOSPD2Q8NHP6 518 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 FAM168AQ92567 244 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 ZNF224Q9NZL3 707 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 AP3M1Q9Y2T2 418 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 MED31Q9Y3C7 131 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 SNX13Q9Y5W8 968 aa12.32□□□□□ -0.44
GPN3-201ENST00000228827 J3KTA2 159 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 DHHO43323 396 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 IGHG1P01857 330 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 QDPRP09417 244 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 NPR2P20594 1047 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 GSK3BP49841 420 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
GPN3-201ENST00000228827 MEX3DQ86XN8 651 aaKnown RBP12.31□□□□□ -0.44
GPN3-201ENST00000228827 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 SYT14Q8NB59 555 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 FGFBP3Q8TAT2 258 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 ZNF347Q96SE7 839 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 HOPXQ9BPY8 73 aaPredicted RBP12.31□□□□□ -0.44
GPN3-201ENST00000228827 PLK3Q9H4B4 646 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 EFCAB1Q9HAE3 211 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 INIPQ9NRY2 104 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 A4GNTQ9UNA3 340 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
GPN3-201ENST00000228827 A0A096LNT2 108 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 SH3PXD2BA1X283 911 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 PDE5AO76074 875 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 UBL3O95164 117 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 IFNW1P05000 195 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 THRBP10828 461 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 SLC25A16P16260 332 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 NCK1P16333 377 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
GPN3-201ENST00000228827 ST3GAL3Q11203 375 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 RAB39AQ14964 217 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 EFNB3Q15768 340 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 PIWIL3Q7Z3Z3 882 aaKnown RBP12.3□□□□□ -0.44
GPN3-201ENST00000228827 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
GPN3-201ENST00000228827 IL17RDQ8NFM7 739 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 ASB10Q8WXI3 467 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 ZNF75AQ96N20 296 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 ZNF442Q9H7R0 627 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 TMEM38BQ9NVV0 291 aa12.3□□□□□ -0.44
GPN3-201ENST00000228827 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 CD5LO43866 347 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 SERPINA1P01009 418 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 IFI30P13284 250 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 IFNA8P32881 189 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 PDLIM4P50479 330 aa12.29□□□□□ -0.44
GPN3-201ENST00000228827 DAP3P51398 398 aaKnown RBP12.29□□□□□ -0.44
GPN3-201ENST00000228827 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
GPN3-201ENST00000228827 C8orf82Q6P1X6 216 aaPredicted RBP12.29□□□□□ -0.44
GPN3-201ENST00000228827 FKBP9P1Q75LS8 142 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms