RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Ighg1P01869 393 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Ccl11P48298 97 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cdkn2bP55271 130 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Pdap1Q3UHX2 181 aaKnown RBP13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gcnt7Q3V3K7 433 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 C1orf109Q499E6 217 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Nr2f1Q60632 422 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cd55bQ61476 407 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Stx3Q64704 289 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Q810N5 247 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 BpifcQ8C186 509 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gltpd2Q8K0R6 321 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 P2rx2Q8K3P1 485 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 CcsapQ8QZT2 252 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Mmd2Q8R189 247 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Olfr1033Q8VFK5 310 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Raf1Q99N57 648 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cnih4Q9CX13 139 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 9230112D13RikQ9D260 137 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gm15013V9GWY0 266 aa13.38□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Igkv13-85A0A075B666 115 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 A0A1Y7VIU7 259 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 4930469K13RikA0A286YDB2 92 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Morn1A2RTS7 477 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Zfp558E9Q1J0 407 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gm10479K7N6H4 105 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cdh16O88338 830 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Yy2Q3TTC2 378 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 TraddQ3U0V2 310 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 ItgadQ3V0T4 1168 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 NarflQ7TMW6 476 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Efr3aQ8BG67 819 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 MkxQ8BIA3 353 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Klhl24Q8BRG6 600 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Atg16l1Q8C0J2 607 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 MetrnQ8C1Q4 291 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Lin52Q8CD94 116 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Nedd4lQ8CFI0 1004 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Arfip2Q8K221 341 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 TdhQ8K3F7 373 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Olfr788Q8VFI0 311 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cisd1Q91WS0 108 aaKnown RBP13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Hyal1Q91ZJ9 462 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Errfi1Q99JZ7 461 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 AspnQ99MQ4 373 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Lrrc18Q9CQ07 262 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 HypmQ9CR04 117 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 PrknQ9WVS6 464 aa13.37□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Fcgr4A0A0B4J1G0 249 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Olfr1315-ps1A0A140LI66 314 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gm5239D3YYZ2 122 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 4930595D18RikD3Z642 64 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Olfr549E9Q542 316 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Zfp938E9Q9G3 579 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 ArsbP50429 534 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Stat6P52633 837 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gcnt2P97402 401 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Capn11Q6J756 714 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 EndovQ8C9A2 338 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Epc1Q8C9X6 813 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Q8CF31 99 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Olfr1316Q8VG12 314 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Loxl4Q924C6 757 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Tinagl1Q99JR5 466 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 NtmQ99PJ0 344 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Q9CPS8 106 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 CacybpQ9CXW3 229 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Wars2Q9CYK1 360 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Ccdc77Q9CZH8 489 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Lingo1Q9D1T0 614 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Tmem114Q9D563 222 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Asf1bQ9DAP7 202 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Wwp2Q9DBH0 870 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Trim39Q9ESN2 488 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Nme4Q9WV84 186 aa13.36□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gm6710A2ART0 554 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Gm4177D3YTX5 305 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 2010315B03RikJ3QK55 433 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Vmn1r127K7N6J5 305 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Vmn1r142K7N6U0 305 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Vmn1r94K7N6X3 305 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Vmn1r115K7N6Y3 295 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Vmn1r159K7N701 305 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Slc16a8O35308 492 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Rgs7O54829 469 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Aif1O70200 147 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 P01725 110 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Cdh3P10287 822 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 M6prP24668 278 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Mas1P30554 324 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Fosl2P47930 326 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Ca10P61215 328 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 SnnP61807 88 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Copz1P61924 177 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Trappc13Q3TIR1 417 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 Laptm5Q61168 261 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 G6pc3Q6NSQ9 346 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 H2-M2Q6W9L1 343 aa13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 TwistnbQ78WZ7 330 aaKnown RBP13.35□□□□□ -0.27
Sf3b6-201ENSMUST00000046207 PirtQ8BFY0 135 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms