RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CSMD1Q96PZ7 3565 aa16.01■□□□□ 0.15
ZNF558-204ENST00000596172 EFCAB9A8MZ26 197 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 CENPBD1B2RD01 187 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 SERPINI2O75830 405 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 DNAJC8O75937 253 aaPredicted RBP16■□□□□ 0.15
ZNF558-204ENST00000596172 BCL10O95999 233 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 SAGP10523 405 aaPredicted RBP16■□□□□ 0.15
ZNF558-204ENST00000596172 RASSF2P50749 326 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 HMGA2P52926 109 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 PRPS1P60891 318 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 CAMK2DQ13557 499 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 FHL1Q13642 323 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 LAPTM4AQ15012 233 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 TAF11Q15544 211 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 FGD3Q5JSP0 725 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 NCMAPQ5T1S8 102 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 HDDC2Q7Z4H3 204 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 OAFQ86UD1 273 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 CDH24Q86UP0 819 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 MOSPD2Q8NHP6 518 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 NINJ1Q92982 152 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 TMEM54Q969K7 222 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 HS3ST6Q96QI5 342 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 SEPHS2Q99611 448 aa16■□□□□ 0.15
ZNF558-204ENST00000596172 STX18Q9P2W9 335 aaKnown RBP16■□□□□ 0.15
ZNF558-204ENST00000596172 MAGED1Q9Y5V3 778 aaPredicted RBP16■□□□□ 0.15
ZNF558-204ENST00000596172 TRBV4-1A0A0J9YWV2 114 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 SH3PXD2BA1X283 911 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 M0R3G1 203 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 CLOCKO15516 846 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 KRT36O76013 467 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 GADD45GO95257 159 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 STAMBPO95630 424 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 WNT11O96014 354 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 F13BP05160 661 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 HOXB6P17509 224 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 OMPP47874 163 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 CSNK1A1P48729 337 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 DAP3P51398 398 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ARF1P84077 181 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ALG10Q5BKT4 473 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 PHYHD1Q5SRE7 291 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 CARD17Q5XLA6 110 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ZNF627Q7L945 461 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 CCDC36Q8IYA8 594 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 OR4K5Q8NGD3 323 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 OR6N1Q8NGY5 312 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 OR52N5Q8NH56 324 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 OR52J3Q8NH60 311 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ZNF566Q969W8 418 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 CCDC124Q96CT7 223 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 LRGUKQ96M69 825 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 TNFRSF13CQ96RJ3 184 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 MRPL13Q9BYD1 178 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 TRIM15Q9C019 465 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 TXNIPQ9H3M7 391 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 MOV10Q9HCE1 1003 aaKnown RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 KRCC1Q9NPI7 259 aaPredicted RBP15.99■□□□□ 0.15
ZNF558-204ENST00000596172 GLTPQ9NZD2 209 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ST6GALNAC2Q9UJ37 374 aa15.99■□□□□ 0.15
ZNF558-204ENST00000596172 ARPC4-TTLL3A0A0A6YYG9 625 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 DPRXA6NFQ7 191 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 AQP12BA6NM10 295 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ZNF99A8MXY4 864 aaPredicted RBP15.98■□□□□ 0.15
ZNF558-204ENST00000596172 CDC42EP2O14613 210 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 GSC2O15499 205 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 CDH2P19022 906 aaPredicted RBP15.98■□□□□ 0.15
ZNF558-204ENST00000596172 HOXC12P31275 282 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 LIMS1P48059 325 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 SPIBQ01892 262 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 CHRNB3Q05901 458 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 SEC23BQ15437 767 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ACKR1Q16570 336 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 HIST3H3Q16695 136 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 CEACAM16Q2WEN9 425 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 TBRG1Q3YBR2 411 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ZBED5Q49AG3 693 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 FAM98BQ52LJ0 330 aaKnown RBP15.98■□□□□ 0.15
ZNF558-204ENST00000596172 HIKESHIQ53FT3 197 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ARMC4Q5T2S8 1044 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ALKBH2Q6NS38 261 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ADAM5Q6NVV9 412 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 KLHL17Q6TDP4 642 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 AQP12AQ8IXF9 295 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 LRRC75AQ8NAA5 344 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 OR51A7Q8NH64 312 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ASB10Q8WXI3 467 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 NRGNQ92686 78 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ZNF837Q96EG3 531 aaPredicted RBP15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ULBP2Q9BZM5 246 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 LIME1Q9H400 295 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 NPAP1Q9NZP6 1156 aa15.98■□□□□ 0.15
ZNF558-204ENST00000596172 ALPK2Q86TB3 2170 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 PTP4A3O75365 173 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 IGHG1P01857 330 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 IGHMP01871 453 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 CD3EP07766 207 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 PGA4P0DJD7 388 aa15.97■□□□□ 0.15
ZNF558-204ENST00000596172 PGA3P0DJD8 388 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms