RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 STX18Q9P2W9 335 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 SLC13A4Q9UKG4 626 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF232Q9UNY5 417 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF443Q9Y2A4 671 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 AGAP5A6NIR3 686 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 TMPRSS2O15393 492 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 TPST1O60507 370 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 TIPRLO75663 272 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 UGT2B17O75795 530 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 NUDT14O95848 222 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 SEMG1P04279 462 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 FABP3P05413 133 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 FCGR1AP12314 374 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 IL7RP16871 459 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 LCN1P31025 176 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 PRKAR1BP31321 381 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 IL2RGP31785 369 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ATP12AP54707 1039 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 KCNJ10P78508 379 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 MAPK14Q16539 360 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 LIN52Q52LA3 116 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 SHQ1Q6PI26 577 aaKnown RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 DHRS4L2Q6PKH6 230 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF836Q6ZNA1 936 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 VRK2Q86Y07 508 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ZDHHC21Q8IVQ6 265 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 PQLC1Q8N2U9 271 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 GPR32P1Q8NGA4 272 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 OR4C3Q8NH37 302 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 B4GALNT2Q8NHY0 566 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF300Q96RE9 604 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 SNX18Q96RF0 628 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 KLHDC3Q9BQ90 382 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 PSD2Q9BQI7 771 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 RBM4Q9BWF3 364 aaKnown RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 CHID1Q9BWS9 393 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF696Q9H7X3 374 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 IL1RAPQ9NPH3 570 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 NKX1-2Q9UD57 310 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-210ENST00000580713 PCDHB10Q9UN67 800 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 PCDHGB1Q9Y5G3 927 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
TOP3A-210ENST00000580713 CENPVL1A0A0U1RR11 272 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 A0A1W2PNR3 127 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 NPIPB9F8W1W9 429 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 SCDO00767 359 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 LGI1O95970 557 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 MT-ND1P03886 318 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 IFNW1P05000 195 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 TNFRSF1BP20333 461 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 FASP25445 335 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ELK4P28324 431 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 MAGEA2P43356 314 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 OR1E2P47887 323 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 DVL1P1P54792 670 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-210ENST00000580713 CDH15P55291 814 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 SLC34A1Q06495 639 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF141Q15928 474 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 SNCBQ16143 134 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 MST1LQ2TV78 715 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 GLIPR1L2Q4G1C9 344 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 AWAT1Q58HT5 328 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 PDZK1Q5T2W1 519 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 CARM1Q86X55 608 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF527Q8NB42 609 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 LRTOMTQ8WZ04 291 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 PKP2Q99959 881 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 RSPO3Q9BXY4 272 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ARMC7Q9H6L4 198 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 COQ10BQ9H8M1 238 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 UBQLN4Q9NRR5 601 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-210ENST00000580713 KCNE5Q9UJ90 142 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ING1Q9UK53 422 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-210ENST00000580713 SLC9A8Q9Y2E8 581 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 SH3GLB1Q9Y371 365 aa9.36□□□□□ -0.91
TOP3A-210ENST00000580713 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 hCG_2039718K7EN88 272 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 EFNA2O43921 213 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-210ENST00000580713 LINGO3P0C6S8 592 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 SESN3P58005 492 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 RAC3P60763 192 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 ATP6AP1Q15904 470 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 ZSWIM7Q19AV6 140 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 MRPL2Q5T653 305 aaKnown RBP9.35□□□□□ -0.91
TOP3A-210ENST00000580713 FBXW9Q5XUX1 488 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 UGT2A3Q6UWM9 527 aa9.35□□□□□ -0.91
TOP3A-210ENST00000580713 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms