RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDH13-208ENST00000566333 NDUFB2O95178 105 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SOX14O95416 240 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 IGHV3-9P01782 118 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 HIST1H2ABP04908 130 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 IGFBP1P08833 259 aaPredicted RBP7.21□□□□□ -1.26
CDH13-208ENST00000566333 PGA4P0DJD7 388 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PGA3P0DJD8 388 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 ZNF23P17027 643 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 IGFBP2P18065 325 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PRKACGP22612 351 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 AHCYP23526 432 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 IFNGR2P38484 337 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 DAPP51397 102 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 FOXG1P55316 489 aaPredicted RBP7.21□□□□□ -1.26
CDH13-208ENST00000566333 BIDP55957 195 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PRPS1P60891 318 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PPP2R2BQ00005 443 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 IL1RL1Q01638 556 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 TOP3AQ13472 1001 aaPredicted RBP7.21□□□□□ -1.26
CDH13-208ENST00000566333 RCN1Q15293 331 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 MESTQ5EB52 335 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PHYHD1Q5SRE7 291 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 TSPO2Q5TGU0 170 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 NIPAL3Q6P499 406 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SMARCD3Q6STE5 483 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 Q6ZT83 130 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 RASSF6Q6ZTQ3 369 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SLC35D2Q76EJ3 337 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 HIST3H2AQ7L7L0 130 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 AAED1Q7RTV5 226 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 CDK20Q8IZL9 346 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 PQLC1Q8N2U9 271 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SVOPLQ8N434 492 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 CLDN22Q8N7P3 220 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 ZNF610Q8N9Z0 462 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 OR6X1Q8NH79 312 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 GNPDA2Q8TDQ7 276 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 CA5BP1Q8WTZ4 195 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 HIST1H2ACQ93077 130 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 APH1AQ96BI3 265 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
CDH13-208ENST00000566333 SAMD8Q96LT4 415 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 KATNB1Q9BVA0 655 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SLCO5A1Q9H2Y9 848 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 TXNIPQ9H3M7 391 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 NRIP3Q9NQ35 241 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 INIPQ9NRY2 104 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 SLC7A10Q9NS82 523 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 TMEFF2Q9UIK5 374 aaPredicted RBP7.21□□□□□ -1.26
CDH13-208ENST00000566333 PROCRQ9UNN8 238 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 AKAP6Q13023 2319 aa7.21□□□□□ -1.26
CDH13-208ENST00000566333 POLQO75417 2590 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 A0A1W2PRG6 482 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 RRP9O43818 475 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 UPK3AO75631 287 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 OR6A2O95222 327 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 PPP1R3DO95685 299 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 TXNDC12O95881 172 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 CD14P08571 375 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 ITGA5P08648 1049 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 PCYT1AP49585 367 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 DAP3P51398 398 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 CTXN1P60606 82 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 RPL27P61353 136 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 ERVK-25P63136 954 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 CAMK2DQ13557 499 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 C1DQ13901 141 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 HIST3H3Q16695 136 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 FBXW9Q5XUX1 488 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 KDM4DQ6B0I6 523 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 STAC2Q6ZMT1 411 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 HIPK1Q86Z02 1210 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 C20orf196Q8IYI0 205 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 PARP8Q8N3A8 854 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 ICA1LQ8NDH6 482 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 NOXO1Q8NFA2 376 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 OR4Q3Q8NH05 313 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 HDAC2Q92769 488 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 STMN2Q93045 179 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 RASD2Q96D21 266 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 ZNF837Q96EG3 531 aaPredicted RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 Q96M85 177 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 ADAD1Q96M93 576 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 PSMG3-AS1Q96PY0 264 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 KCNK17Q96T54 332 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 RBM24Q9BX46 236 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 POLDIP3Q9BY77 421 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 MRPL13Q9BYD1 178 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 LINC00470Q9BZP3 86 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 NELFAQ9H3P2 528 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 HEATR1Q9H583 2144 aaKnown RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 SMURF2Q9HAU4 748 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 IL20Q9NYY1 176 aa7.2□□□□□ -1.26
CDH13-208ENST00000566333 KLF2Q9Y5W3 355 aaPredicted RBP7.2□□□□□ -1.26
CDH13-208ENST00000566333 RAI1Q7Z5J4 1906 aaPredicted RBP7.19□□□□□ -1.26
CDH13-208ENST00000566333 IGKV1D-43A0A0B4J1Z2 117 aa7.19□□□□□ -1.26
CDH13-208ENST00000566333 TEX13CA0A0J9YWL9 993 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms