RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ASF1AQ9Y294 204 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZNF443Q9Y2A4 671 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 TMEM5Q9Y2B1 443 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 PLEKHM1Q9Y4G2 1056 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HSPB11Q9Y547 144 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 NUBP2Q9Y5Y2 271 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CACNG2Q9Y698 323 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SIRT4Q9Y6E7 314 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 KCNE3Q9Y6H6 103 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CLCA3PQ9Y6N3 262 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 PCNTO95613 3336 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HTTP42858 3142 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SRCAPQ6ZRS2 3230 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DNAH12Q6ZR08 3092 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 A0A087WV62 115 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MEIKINA0A087WXM9 373 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D3KA0A087X1G2 549 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 A0A0G2JN53 185 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 A0A1B0GUH1 482 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 C2orf92A0A1B0GVN3 265 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 A0A1W2PQ72 361 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FEZF1A0PJY2 475 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D3BA6NDS4 549 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D3FA6NER0 549 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR6C65A6NJZ3 312 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LRRN3E7EW58 273 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 K7ESF4 209 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PGRMC2O15173 223 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OGG1O15527 345 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FABP7O15540 132 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ERI3O43414 337 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 AKR7A2O43488 359 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FRS3O43559 492 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TLX3O43711 291 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR1F1O43749 312 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LCMT2O60294 686 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 PQBP1O60828 265 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 KCNJ13O60928 360 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NOS1APO75052 506 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 PEX14O75381 377 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PRKRAO75569 313 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 GATBO75879 557 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC22A5O76082 557 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TPPPO94811 219 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SOX30O94993 753 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC2A10O95528 541 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TGM6O95932 706 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CH25HO95992 272 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DHFRP00374 187 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 AK1P00568 194 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TFP02787 698 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MT-ND5P03915 603 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TCRBP04435 133 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GUSBP08236 651 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 HNRNPA1P09651 372 aaKnown RBP eCLIP2.23□□□□□ -2.05
SPG11-223ENST00000560858 SBK2P0C263 348 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC35G4P0C7Q5 338 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SMIM10L1P0DMW3 83 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PEPDP12955 493 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 HOXB2P14652 356 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CPN1P15169 458 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 IL9P15248 144 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 UGT2B7P16662 529 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CEBPBP17676 345 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ATF1P18846 271 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RAB3BP20337 219 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NT5EP21589 574 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PAICSP22234 425 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 AHCYP23526 432 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 HTR2AP28223 471 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NDUFS1P28331 727 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SHC1P29353 583 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 UQCRC1P31930 480 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 IFNA8P32881 189 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACSL1P33121 698 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DRD3P35462 400 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TALDO1P37837 337 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 P2RY2P41231 377 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MAP3K8P41279 467 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PITPNBP48739 271 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 INPP1P49441 399 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DIO1P49895 249 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PDX1P52945 283 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR10A3P58181 314 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZP1P60852 638 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ST8SIA6P61647 398 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 STXBP1P61764 594 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 SNRPD2P62316 118 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACTA2P62736 377 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACTG2P63267 376 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACTC1P68032 377 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACTA1P68133 377 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NTHL1P78549 312 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TNFRSF17Q02223 184 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CFHR3Q02985 330 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF85Q03923 595 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CSTF1Q05048 431 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 PRDX1Q06830 199 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 MRPL28Q13084 256 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 ENPP2Q13822 863 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms