RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 OPN4Q9UHM6 478 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 SCOCQ9UIL1 159 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 FAF1Q9UNN5 650 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 POLR3HQ9Y535 204 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TIMM22Q9Y584 194 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PPIAL4EA0A075B759 164 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 DNAJC9-AS1A6NH13 148 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 DUXAA6NLW8 204 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PPIAL4DF5H284 164 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SCAMP2O15127 329 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ZSCAN12O43309 604 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF208O43345 1280 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 AKAP10O43572 662 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SEC22BO75396 215 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SKAP2O75563 359 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 RSL1D1O76021 490 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 VAMP5O95183 116 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 CSTAP01040 98 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SBK3P0C264 359 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 UBTFL6P0CB48 400 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PPIAL4FP0DN26 164 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 CCNA2P20248 432 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 GLRXP35754 106 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 RAD52P43351 418 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 HTR3AP46098 478 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PLTPP55058 493 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SH3BGRP55822 239 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TUBA1BP68363 451 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TUBA4AP68366 448 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 CAV1Q03135 178 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 LCP2Q13094 533 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SKP2Q13309 424 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SNTB2Q13425 540 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 SLC9A3R2Q15599 337 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF141Q15928 474 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PDZK1Q5T2W1 519 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TMEM225Q6GV28 225 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 LEG1Q6P5S2 330 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PAQR6Q6TCH4 344 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 OR9K2Q8NGE7 335 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 POP5Q969H6 163 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TMIGD2Q96BF3 282 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 MTERF3Q96E29 417 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF385AQ96PM9 386 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 KCNA7Q96RP8 456 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 MRPL37Q9BZE1 423 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 OR11A1Q9GZK7 315 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 BEX1Q9HBH7 125 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 CRLF2Q9HC73 371 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PDP1Q9P0J1 537 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 NUP50Q9UKX7 468 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF346Q9UL40 294 aaKnown RBP4.1□□□□□ -1.75
ATXN3-229ENST00000554672 PCDHGB4Q9UN71 923 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 NOX1Q9Y5S8 564 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 KCNE3Q9Y6H6 103 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 EXPH5Q8NEV8 1989 aa4.1□□□□□ -1.75
ATXN3-229ENST00000554672 TMED7-TICAM2A0A0A6YYA0 188 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 H3BQF6 201 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RPL36A-HNRNPH2H7BZ11 118 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SLC28A1O00337 649 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 FCMRO60667 390 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 STX11O75558 287 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 CRCPO75575 148 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 UPK3AO75631 287 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RP2O75695 350 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 UGT2B17O75795 530 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 AK1P00568 194 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 IGHV2-5P01817 119 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 GPIP06744 558 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 INHBAP08476 426 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PRPH2P23942 346 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 ATP5F1P24539 256 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 LMO1P25800 156 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RYKP34925 604 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PCGF2P35227 344 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PHBP35232 272 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PGM1P36871 562 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PAFAH1B1P43034 410 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 CRYBB2P43320 205 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 MTNR1AP48039 350 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SERPINB9P50453 376 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 ATP4BP51164 291 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PRKAA2P54646 552 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms