RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RASD2Q96D21 266 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SLC41A3Q96GZ6 507 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 C12orf42Q96LP6 360 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 GLT1D1Q96MS3 346 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TGM7Q96PF1 710 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 OR5B2Q96R09 309 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SPATA16Q9BXB7 569 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 GON7Q9BXV9 100 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 RHOJQ9H4E5 214 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 GPN2Q9H9Y4 310 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 FN3KRPQ9HA64 309 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TM9SF3Q9HD45 589 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 POLE4Q9NR33 117 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SLC17A5Q9NRA2 495 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 HOXC10Q9NYD6 342 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 BFARQ9NZS9 450 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ANAPC7Q9UJX3 599 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TMCO1Q9UM00 188 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 PPIAL4AQ9Y536 164 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 DCHS1Q96JQ0 3298 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ZNFX1Q9P2E3 1918 aaKnown RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ASTN1O14525 1302 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ELP1O95163 1332 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 MROH7Q68CQ1 1323 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ATAD5Q96QE3 1844 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 MYO9BQ13459 2157 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 WDR87Q6ZQQ6 2873 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 MYH2Q9UKX2 1941 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TRAV26-1A0A087WT03 109 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 A0A0U1RQS6 177 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 ARHGEF35A5YM69 484 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 GOLGA8OA6NCC3 632 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 E7ESA3 106 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 GOLGA8NF8WBI6 632 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 MSH4O15457 936 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TBL1XO60907 577 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 NEBLO76041 1014 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TOXO94900 526 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 WISP3O95389 354 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 AGTP01019 485 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 JCHAINP01591 159 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SEMG1P04279 462 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 PGCP20142 388 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 IMPDH1P20839 514 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SERPINA2P20848 420 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 NT5EP21589 574 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 LAP3P28838 519 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TDO2P48775 406 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SUCLG1P53597 346 aaKnown RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 BEX3Q00994 111 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 EWSR1Q01844 656 aaKnown RBP eCLIP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SLC10A7Q0GE19 358 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 MXD4Q14582 209 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 C16orf72Q14CZ0 275 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 ARMC12Q5T9G4 340 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 PRAMEF5Q5TYX0 476 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 PRAMEF6Q5VXH4 476 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 OR5M10Q6IEU7 315 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 CXCL17Q6UXB2 119 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 ZYG11AQ6WRX3 759 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 CENPQQ7L2Z9 268 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 DEFB128Q7Z7B8 93 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 PPP1R27Q86WC6 154 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 PAQR7Q86WK9 346 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 LRRC75A-AS1Q8N1F1 130 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 CLEC4FQ8N1N0 589 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 ATP6V0D2Q8N8Y2 350 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 OR9K2Q8NGE7 335 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 OR5D13Q8NGL4 314 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 RPL3LQ92901 407 aaKnown RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 IL22RA2Q969J5 263 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 ADIPOR1Q96A54 375 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 C12orf66Q96MD2 445 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 CLCC1Q96S66 551 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 CCNL2Q96S94 520 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SCRT1Q9BWW7 348 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 OR51J1Q9H342 316 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 YY1AP1Q9H869 796 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 RAB20Q9NX57 234 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SLC2A8Q9NY64 477 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 MBD2Q9UBB5 411 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 TMED5Q9Y3A6 229 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 NPTNQ9Y639 398 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SIPA1L1O43166 1804 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 KMT2BQ9UMN6 2715 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-210ENST00000553693 COL4A6Q14031 1691 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 SPTBN4Q9H254 2564 aa2.37□□□□□ -2.03
SCFD1-210ENST00000553693 MYH13Q9UKX3 1938 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF236Q9UL36 1845 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 A0A075B6Q4 140 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 A0A1B0GUA9 196 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 A0A1B0GVL5 298 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 HEATR9A2RTY3 570 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 SMCO3A2RU48 225 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 BTBD17A6NE02 478 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ZSCAN5BA6NJL1 495 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 DHRS7CA6NNS2 312 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 F5H6K3 240 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms