RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 UPK1BO75841 260 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 OR2J2O76002 312 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 STK17BO94768 372 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF432O94892 652 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CDRT1O95170 752 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 APOL3O95236 402 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 HPP00738 406 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 JMJD7P0C870 316 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 NR2C1P13056 603 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CD59P13987 128 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF28P17035 718 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PTNP21246 168 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 MYL9P24844 172 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SDC2P34741 201 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CDKN2AP42771 156 aaKnown RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SSR4P51571 173 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 DEFA1P59665 94 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 DEFA3P59666 94 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RPS15P62841 145 aaKnown RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RPS25P62851 125 aaKnown RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PPP3R1P63098 170 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SIRPAP78324 504 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 FABP5Q01469 135 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CHAF1BQ13112 559 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TOMM34Q15785 309 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF239Q16600 458 aaKnown RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 YIF1BQ5BJH7 314 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 MESTQ5EB52 335 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 LINC01590Q5TEZ4 76 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 FAM69BQ5VUD6 431 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 FCRLBQ6BAA4 426 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 C22orf42Q6IC83 251 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 LCN10Q6JVE6 187 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF544Q6NX49 715 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 JMJD6Q6NYC1 403 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 C3orf33Q6P1S2 294 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 H1FNTQ75WM6 255 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RAB11FIP2Q7L804 512 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SHFQ7M4L6 423 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 FAM220AQ7Z4H9 259 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PXKQ7Z7A4 578 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TMEM99Q8N816 258 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 FADS6Q8N9I5 356 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CYB561A3Q8NBI2 242 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 NEIL3Q8TAT5 605 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SETD6Q8TBK2 473 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RPS4Y2Q8TD47 263 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PAQR8Q8TEZ7 354 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 NTNG2Q96CW9 530 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 NXPE2Q96DL1 559 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SMIM19Q96E16 107 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZMYND19Q96E35 227 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 C4orf36Q96KX1 117 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 Q96M85 177 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 KLHL15Q96M94 604 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 NECAB3Q96P71 396 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 IP6K3Q96PC2 410 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TSPAN32Q96QS1 320 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TIMP4Q99727 224 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TTYH2Q9BSA4 534 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 MRI1Q9BV20 369 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ANGPTL4Q9BY76 406 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 GSX1Q9H4S2 264 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SP140LQ9H930 580 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 WDR76Q9H967 626 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TMEM9BQ9NQ34 198 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 KLHL1Q9NR64 748 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SNTG1Q9NSN8 517 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SACM1LQ9NTJ5 587 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ALKBH4Q9NXW9 302 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TAS2R5Q9NYW4 299 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RABL2AQ9UBK7 228 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF346Q9UL40 294 aaKnown RBP6.59□□□□□ -1.35
ATXN3-221ENST00000553498 RABL2BQ9UNT1 228 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 HDGFL3Q9Y3E1 203 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CMAHPQ9Y471 501 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TRIOBPQ9H2D6 2365 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ATG2BQ96BY7 2078 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 GJE1A6NN92 205 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF879B4DU55 563 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 J3QLW9 94 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 DNPH1O43598 174 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ITGA10O75578 1167 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 SC5DO75845 299 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PTTG1O95997 202 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 LALBAP00709 142 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TFP02787 698 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 KRT8P05787 483 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CLUP10909 449 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF17P17021 662 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF19P17023 458 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 MAPK3P27361 379 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 GRPRP30550 384 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PTGDSP41222 190 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 DSCR4P56555 118 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 MLF1P58340 268 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 GLO1Q04760 184 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PUDPQ08623 228 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 SELENBP1Q13228 472 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms