RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 VAX1Q5SQQ9 334 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 PRAMEF20Q5VT98 475 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 CTAGE6Q86UF2 777 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 LHFPL3Q86UP9 236 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 FAM71E2Q8N5Q1 922 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 MS4A15Q8N5U1 240 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 SLC22A8Q8TCC7 542 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 ACER1Q8TDN7 264 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 PLIN2Q99541 437 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 HES7Q9BYE0 225 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 UGT1A7Q9HAW7 530 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 UGT1A10Q9HAW8 530 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 UGT1A8Q9HAW9 530 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 MRPL47Q9HD33 250 aaKnown RBP3.44□□□□□ -1.86
SYNE2-210ENST00000553455 EXD2Q9NVH0 621 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 CTNNA3Q9UI47 895 aa3.44□□□□□ -1.86
SYNE2-210ENST00000553455 SCN2AQ99250 2005 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 NSD2O96028 1365 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 OR2AG2A6NM03 316 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 H0Y9J4 135 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 MGRN1O60291 552 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 KRT6AP02538 564 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 ALDOBP05062 364 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 CRISP2P16562 243 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 IFNA8P32881 189 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 RORAP35398 523 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.86
SYNE2-210ENST00000553455 GPX6P59796 221 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 FZD2Q14332 565 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 HSP90AB3PQ58FF7 597 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 LCN12Q6JVE5 192 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 CNIH2Q6PI25 160 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 METAP1DQ6UB28 335 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-210ENST00000553455 SASS6Q6UVJ0 657 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 Q8N7P7 452 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 SPATA4Q8NEY3 305 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 B3GNT7Q8NFL0 401 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 OR4F15Q8NGB8 312 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 OR2G2Q8NGZ5 317 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 RARRES2Q99969 163 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 KCTD14Q9BQ13 255 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-210ENST00000553455 NEU3Q9UQ49 428 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 TRAPPC4Q9Y296 219 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 ATRXP46100 2492 aa3.43□□□□□ -1.86
SYNE2-210ENST00000553455 ZNF726A6NNF4 738 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 SLC31A2O15432 143 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 RNF13O43567 381 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 ERLIN2O94905 339 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 TSPAN13O95857 204 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 GKN3PP0CG01 181 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 TNNI1P19237 187 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 CCNA1P78396 465 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 TGM3Q08188 693 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 PSG5Q15238 335 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 PPP1R7Q15435 360 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 LRRC66Q68CR7 880 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 OR10G9Q8NGN4 311 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 OR1S2Q8NGQ3 325 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 RNF138Q8WVD3 245 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 ELMO1Q92556 727 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 MED8Q96G25 268 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 ILKAPQ9H0C8 392 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-210ENST00000553455 NEUROG2Q9H2A3 272 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 ASB8Q9H765 288 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 ANKRA2Q9H9E1 313 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 NUP50Q9UKX7 468 aa3.42□□□□□ -1.86
SYNE2-210ENST00000553455 MSH6P52701 1360 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 PINLYPA6NC86 204 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 SOX15O60248 233 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
SYNE2-210ENST00000553455 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 ACLYP53396 1101 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 CDH6P55285 790 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 MRPS22P82650 360 aaKnown RBP3.41□□□□□ -1.86
SYNE2-210ENST00000553455 ARHGAP19Q14CB8 494 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 SGCAQ16586 387 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 VPS26BQ4G0F5 336 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 FRMPD2BQ6IN97 320 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 ZNF836Q6ZNA1 936 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 ZNF621Q6ZSS3 439 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 GTPBP8Q8N3Z3 284 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-210ENST00000553455 OR1N2Q8NGR9 330 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 GPR151Q8TDV0 419 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 STMN2Q93045 179 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 TMEM54Q969K7 222 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 SGK3Q96BR1 496 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 RACGAP1Q9H0H5 632 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 CWH43Q9H720 699 aa3.41□□□□□ -1.86
SYNE2-210ENST00000553455 PACSIN2Q9UNF0 486 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-210ENST00000553455 A0A1B0GVI7 797 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 TRIM49D1C9J1S8 452 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 FGGP02679 453 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 CSF3P09919 207 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 IGHV3-43DP0DP04 118 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 NR2C1P13056 603 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 DRD3P35462 400 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 NSG1P42857 185 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms