RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PAPD5Q8NDF8 572 aaKnown RBP12.5□□□□□ -0.41
LTBR-209ENST00000541102 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 LILRB1Q8NHL6 650 aaPredicted RBP12.5□□□□□ -0.41
LTBR-209ENST00000541102 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 ACOT11Q8WXI4 607 aaPredicted RBP12.5□□□□□ -0.41
LTBR-209ENST00000541102 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 HS6ST2Q96MM7 605 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 EPYCQ99645 322 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 TAS2R5Q9NYW4 299 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 OR2T1O43869 369 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 FKBP6O75344 327 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 TIPRLO75663 272 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 KRT33AO76009 404 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 VAMP5O95183 116 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 ITGA5P08648 1049 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 UMPSP11172 480 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 ZNF26P17031 533 aaPredicted RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 CDH2P19022 906 aaPredicted RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 GPR4P46093 362 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 PRKCDQ05655 676 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 GABRA6Q16445 453 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 ADAM5Q6NVV9 412 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 EPHX4Q8IUS5 362 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 LRRC75A-AS1Q8N1F1 130 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 KBTBD8Q8NFY9 601 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 OR4K5Q8NGD3 323 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 BPIFA2Q96DR5 249 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 FAM46AQ96IP4 442 aaKnown RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 ZNF347Q96SE7 839 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 ANKRD19PQ9H560 264 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 DENND2DQ9H6A0 471 aaPredicted RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 MRPL39Q9NYK5 338 aaKnown RBP12.49□□□□□ -0.41
LTBR-209ENST00000541102 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 LAMP3Q9UQV4 416 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 RASD1Q9Y272 281 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 U3KQV3 271 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
LTBR-209ENST00000541102 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 CIB2O75838 187 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 MT-ATP6P00846 226 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 IFNA8P32881 189 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 OMPP47874 163 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 SELENOPP49908 381 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 HMGA2P52926 109 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 ACTR3P61158 418 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 LGALS3BPQ08380 585 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 PMS2P3Q13401 168 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
LTBR-209ENST00000541102 OR2T5Q6IEZ7 315 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 OR7E24Q6IFN5 339 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 OR2T29Q8NH02 315 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 OR5J2Q8NH18 312 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 MUS81Q96NY9 551 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 SLCO5A1Q9H2Y9 848 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
LTBR-209ENST00000541102 FKRPQ9H9S5 495 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 NTN4Q9HB63 628 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 NANSQ9NR45 359 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 B3GALT5Q9Y2C3 310 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
LTBR-209ENST00000541102 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 TRAV27A0A087WT01 109 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 M0R1B8 84 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 PDLIM1O00151 329 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 TNFRSF11BO00300 401 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 ABCD4O14678 606 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 CST1P01037 141 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 IGF2P01344 180 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 AQP2P41181 271 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 PTH2RP49190 550 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 CLDN17P56750 224 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 TGFBR3Q03167 851 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 RPL18Q07020 188 aaKnown RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 ZNF770Q6IQ21 691 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 KLHL17Q6TDP4 642 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 ZER1Q7Z7L7 766 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 HS3ST5Q8IZT8 346 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms