RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SDK2Q58EX2 2172 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 IGHA1P01876 353 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 P2RX1P51575 399 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 EGR4Q05215 589 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 TMEM44Q2T9K0 475 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 PXDC1Q5TGL8 231 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 STPG1Q5TH74 334 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 TMEM91Q6ZNR0 172 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 RASL10BQ96S79 203 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 IFT27Q9BW83 186 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 TEX12Q9BXU0 123 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 EXTL2Q9UBQ6 330 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 EXOGQ9Y2C4 368 aaKnown RBP15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 MPDZO75970 2070 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 NAGAP17050 411 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 PTGS2P35354 604 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 DBPQ10586 325 aaPredicted RBP15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 CBFBQ13951 182 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 GXYLT1Q4G148 440 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 KLBQ86Z14 1044 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 DEFB124Q8NES8 71 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 BBS1Q8NFJ9 593 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR10G3Q8NGC4 313 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 SECISBP2Q96T21 854 aaKnown RBP15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 HDHD2Q9H0R4 259 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF160Q9HCG1 818 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 COQ3Q9NZJ6 369 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 EIF3KQ9UBQ5 218 aaKnown RBP15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 DMXL1Q9Y485 3027 aa15.47■□□□□ 0.07
PCDHB17P-201ENST00000539533 FAM183AA6NL82 134 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 DVL2O14641 736 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 HMGN1P05114 100 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 PGCP20142 388 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 OTX2P32243 289 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 GPR176Q14439 515 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 EXT1Q16394 746 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 COL28A1Q2UY09 1125 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 FCRLBQ6BAA4 426 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 RPL13AP3Q6NVV1 102 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF322Q6U7Q0 402 aaPredicted RBP15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 B3GLCTQ6Y288 498 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 NUP54Q7Z3B4 507 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 LNX2Q8N448 690 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 GPR119Q8TDV5 335 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 ACOT12Q8WYK0 555 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 HYLS1Q96M11 299 aa15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 FARSAQ9Y285 508 aaKnown RBP15.46■□□□□ 0.07
PCDHB17P-201ENST00000539533 NSG1A0A0A6YYJ2 146 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 CDC40O60508 579 aaKnown RBP eCLIP15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 ITGA10O75578 1167 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 PDGFAP04085 211 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 SLC6A1P30531 599 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 HTR1FP30939 366 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 ATP6V1E1P36543 226 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 TMEM164Q5U3C3 297 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 RTL4Q6ZR62 310 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 NDUFAF7Q7L592 441 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 PPP1R32Q7Z5V6 425 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 NR2C2APQ86WQ0 139 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 SLC22A8Q8TCC7 542 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 MARVELD3Q96A59 401 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 DNAJA3Q96EY1 480 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 CCNL2Q96S94 520 aaPredicted RBP15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 SLC19A3Q9BZV2 496 aa15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 HINT3Q9NQE9 182 aaKnown RBP15.46■□□□□ 0.06
PCDHB17P-201ENST00000539533 LRP3O75074 770 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 OR7A10O76100 309 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 PPP1R3DO95685 299 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 GALP22466 123 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 BTG1P62324 171 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 FOXK2Q01167 660 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 TAGLNQ01995 201 aaKnown RBP15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 EIF3IQ13347 325 aaKnown RBP15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 IDNKQ5T6J7 187 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 CPOQ8IVL8 374 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 C9orf62Q8N4C0 152 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 M1APQ8TC57 530 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 KTI12Q96EK9 354 aaPredicted RBP15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 MOGAT1Q96PD6 335 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 UBL7Q96S82 380 aaPredicted RBP15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 MMP25Q9NPA2 562 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 MED17Q9NVC6 651 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 KLRF1Q9NZS2 232 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 HRH3Q9Y5N1 445 aa15.45■□□□□ 0.06
PCDHB17P-201ENST00000539533 LANCL1O43813 399 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 RGS9O75916 674 aaPredicted RBP15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 DKK1O94907 266 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 PAHP00439 452 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 CD63P08962 238 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 FBXO45P0C2W1 286 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 GP1BBP13224 206 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 HK1P19367 917 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 F8A1P23610 371 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 LTBQ06643 244 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 C17orf67Q0P5P2 114 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 ZBTB37Q5TC79 503 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 ESX1Q8N693 406 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 C12orf4Q9NQ89 552 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 MED11Q9P086 117 aa15.44■□□□□ 0.06
PCDHB17P-201ENST00000539533 TNFRSF10DQ9UBN6 386 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms