RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RAB11BQ15907 218 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 UBE2SQ16763 222 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ATP6V1FQ16864 119 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 TCTN1Q2MV58 587 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SOWAHCQ53LP3 525 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SPOUT1Q5T280 376 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 HIST2H3PS2Q5TEC6 136 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 STPG1Q5TH74 334 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 LRRC38Q5VT99 294 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ZDHHC20Q5W0Z9 365 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 APOBEC3HQ6NTF7 200 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 FAM198BQ6UWH4 519 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 METTL7BQ6UX53 244 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 BTNL3Q6UXE8 466 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 LINGO2Q7L985 606 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 TRMT1LQ7Z2T5 733 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 TIPARPQ7Z3E1 657 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PAQR7Q86WK9 346 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 CACUL1Q86Y37 369 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SNX29P2Q8IUI4 249 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MFSD6LQ8IWD5 586 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 COMMD1Q8N668 190 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PRELID2Q8N945 189 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 L3MBTL4Q8NA19 623 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 OR2M7Q8NG81 312 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 OR52J3Q8NH60 311 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 OR5K1Q8NHB7 308 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ZCCHC10Q8TBK6 192 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 CYGBQ8WWM9 190 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ACOT12Q8WYK0 555 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 FBXO32Q969P5 355 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ERGIC1Q969X5 290 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MRPL38Q96DV4 380 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 CCDC126Q96EE4 140 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MALSU1Q96EH3 234 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 TMEM19Q96HH6 336 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 KLF6Q99612 283 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PHB2Q99623 299 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 CMSS1Q9BQ75 279 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 FUZQ9BT04 418 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF426Q9BUY5 554 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SPRY4Q9C004 299 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PIGMQ9H3S5 423 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 NXF3Q9H4D5 531 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 TUBA4BQ9H853 241 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MKKSQ9NPJ1 570 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 MRPL22Q9NWU5 206 aaKnown RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 DDIT4Q9NX09 232 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SOHLH2Q9NX45 425 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SPG21Q9NZD8 308 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PDP1Q9P0J1 537 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 GNG8Q9UK08 70 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 PRG3Q9Y2Y8 225 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-219ENST00000534049 V9GYS6 101 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 SIPA1L1O43166 1804 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 LOC285556D6RIA3 1793 aa3.81□□□□□ -1.8
ITGB1-219ENST00000534049 COL2A1P02458 1487 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 COL6A3P12111 3177 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TCF20Q9UGU0 1960 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 VCANP13611 3396 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 A0A1W2PPH5 198 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TRBC2A0A5B9 178 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM74A7A6NL05 159 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 DUXAA6NLW8 204 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ERI2A8K979 691 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SERPINE3A8MV23 424 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 A8MV72 311 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MAGEB17A8MXT2 336 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 DISC1C4P0D8 188 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM72CH0Y354 149 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FOXE1O00358 373 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CDIPTO14735 213 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 UBDO15205 165 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC16A4O15374 487 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MBTPS2O43462 519 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 XPNPEP2O43895 674 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 KLK8O60259 260 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 AQP8O94778 261 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SERPINA3P01011 423 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 IFNA21P01568 189 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 HLA-DQB1P01920 261 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RPLP0P05388 317 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 C8GP07360 202 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OR52Z1P0C646 297 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FGF7P21781 194 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PCMT1P22061 227 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 HNRNPA2B1P22626 353 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC2A5P22732 501 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC6A1P30531 599 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ADORA1P30542 326 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RABIFP47224 123 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CDX1P47902 265 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 NUMBP49757 651 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RAG2P55895 527 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ARPP19P56211 112 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CLDN2P57739 230 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms