RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TMEM38AQ9H6F2 299 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 KCNJ16Q9NPI9 418 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF701Q9NV72 531 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 NPFFR2Q9Y5X5 522 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 DNAJB6O75190 326 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 SFTPBP07988 381 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 EIF2B1Q14232 305 aaKnown RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 SORCS2Q96PQ0 1159 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 KIR3DX1Q9H7L2 352 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ARRDC5A6NEK1 342 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 HLXQ14774 488 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 LGALSLQ3ZCW2 172 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF595Q8IYB9 648 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 BARHL1Q9BZE3 327 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ULBP3Q9BZM4 244 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 CHATP28329 748 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 TSPAN31Q12999 210 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 RAB11BQ15907 218 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 SLC16A13Q7RTY0 426 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 MSRB3Q8IXL7 192 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 C1QTNF2Q9BXJ5 285 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 UBQLN4Q9NRR5 601 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 C14orf166Q9Y224 244 aaKnown RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 MED6O75586 246 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 F13BP05160 661 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SMIM6P0DI80 62 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 RAB6AP20340 208 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 DPTQ07507 201 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF322Q6U7Q0 402 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-213ENST00000514442 TECPR1Q7Z6L1 1165 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF561Q8N587 486 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CCDC54Q8NEL0 328 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 STK35Q8TDR2 534 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 EDAQ92838 391 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 LMF1Q96S06 567 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 FGF21Q9NSA1 209 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 HSPA12AO43301 675 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-213ENST00000514442 MGMTP16455 207 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SLC6A1P30531 599 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 HTR1FP30939 366 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SNRPEP62304 92 aaKnown RBP12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SNTB1Q13884 538 aaKnown RBP12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SLC48A1Q6P1K1 146 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 RABEPKQ7Z6M1 372 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 OR52H1Q8NGJ2 320 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SNRPGP15A8MWD9 76 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 ADAM10O14672 748 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 NAGAP17050 411 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CD27P26842 260 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SLC6A12P48065 614 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 TMEM196Q5HYL7 178 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CYHR1Q6ZMK1 362 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CDC6Q99741 560 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 MED20Q9H944 212 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 F5P12259 2224 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 TRIM77I1YAP6 450 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 SULT2B1O00204 365 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 AQP8O94778 261 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF28P17035 718 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CPT2P23786 658 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 RAG2P55895 527 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 KCNAB1Q14722 419 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 Q5BKY6 102 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 OR10A5Q9H207 317 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 EVA1AQ9H8M9 152 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 RNF215Q9Y6U7 377 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 QSER1Q2KHR3 1735 aa12.1□□□□□ -0.47
TCOF1-213ENST00000514442 MEIS3P1A6NDR6 274 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 OR2F2O95006 317 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 LPLP06858 475 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 GLULP15104 373 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 PTAFRP25105 342 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms