RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 RFLNBQ8N5W9 214 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ZNF511Q8NB15 262 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ZBTB8AQ96BR9 441 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SGCZQ96LD1 299 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 B3GNT4Q9C0J1 378 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SYT4Q9H2B2 425 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 MARCH7Q9H992 704 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 HPF1Q9NWY4 346 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ALKBH4Q9NXW9 302 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 FOXJ2Q9P0K8 574 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 COPS3Q9UNS2 423 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 B3GALT5Q9Y2C3 310 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SPEGQ15772 3267 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 A6NIZ1 184 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 CD8B2A6NJW9 211 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 H7C1C5 153 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 DCTN6O00399 190 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 LRP3O75074 770 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 CD8BP10966 210 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 IMPDH2P12268 514 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 RAP1BP61224 184 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 LCN6P62502 163 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 RAP1AP62834 184 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SIRPAP78324 504 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 MXD1Q05195 221 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 DNASE1L3Q13609 305 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 INPP5JQ15735 1006 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ZNF684Q5T5D7 378 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 HES3Q5TGS1 186 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 FAM205BPQ63HN1 556 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 DHRS13Q6UX07 377 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 NLGN4YQ8NFZ3 816 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 HAVCR2Q8TDQ0 301 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 WNT2BQ93097 391 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 SHISA8B8ZZ34 492 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CTDSP2O14595 271 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CASKO14936 926 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SNX4O95219 450 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SERPINA7P05543 415 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 TACSTD2P09758 323 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CCL3P10147 92 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
PTPN7-216ENST00000492977 TLE3Q04726 772 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SLC3A1Q07837 685 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 HNRNPA0Q13151 305 aaKnown RBP12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SELENBP1Q13228 472 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 TRIP6Q15654 476 aaKnown RBP12.63□□□□□ -0.39
PTPN7-216ENST00000492977 LYPD4Q6UWN0 246 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 PXKQ7Z7A4 578 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CCDC190Q86UF4 302 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CDC20BQ86Y33 519 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SYT14Q8NB59 555 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 ADPRHL1Q8NDY3 354 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 ABHD4Q8TB40 342 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 AP3S1Q92572 193 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SMIM19Q96E16 107 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 PGLYRP3Q96LB9 341 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 CEP19Q96LK0 163 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 P4HTMQ9NXG6 502 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-216ENST00000492977 GNG8Q9UK08 70 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 B9D1Q9UPM9 204 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 TMEM14AQ9Y6G1 99 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 SDK2Q58EX2 2172 aa12.63□□□□□ -0.39
PTPN7-216ENST00000492977 EML6Q6ZMW3 1958 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 SLC22A23A1A5C7 686 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 H3BML4 177 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 PHYHO14832 338 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 SULT1C4O75897 302 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 SERPINA3P01011 423 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 IL11P20809 199 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 CRABP1P29762 137 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 TGM4P49221 684 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 MTNR1BP49286 362 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 Q0VFX4 171 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 MRPL28Q13084 256 aaKnown RBP12.62□□□□□ -0.39
PTPN7-216ENST00000492977 MYBPHQ13203 477 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
PTPN7-216ENST00000492977 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms