RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 HOXB6P17509 224 aaKnown RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 AHCYP23526 432 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IFNA8P32881 189 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 CLDN17P56750 224 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ADAM8P78325 824 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 POU3F1Q03052 451 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 FAM27E3Q08E93 113 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 DBPQ10586 325 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SNTB1Q13884 538 aaKnown RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ACKR1Q16570 336 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SLC25A35Q3KQZ1 300 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ZBED5Q49AG3 693 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM201Q5SNT2 666 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ARMC4Q5T2S8 1044 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 GTF2IRD2BQ6EKJ0 949 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 LRFN4Q6PJG9 635 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 KLHL17Q6TDP4 642 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 STAC2Q6ZMT1 411 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 FAM122BQ7Z309 247 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 NANOGNBQ7Z5D8 188 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 LUZP2Q86TE4 346 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 OAFQ86UD1 273 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 GTF2IRD2Q86UP8 949 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IGFN1Q86VF2 1251 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 CLDN22Q8N7P3 220 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 AQP11Q8NBQ7 271 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 OR8D4Q8NGM9 314 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 CA5BP1Q8WTZ4 195 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF837Q96EG3 531 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 RAB3IPQ96QF0 476 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 OR2M2Q96R28 347 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 FEVQ99581 238 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 NIPSNAP1Q9BPW8 284 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SPOCK3Q9BQ16 436 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ASPNQ9BXN1 380 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 DGCR6LQ9BY27 220 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 MRPL13Q9BYD1 178 aaKnown RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 PLA2G12AQ9BZM1 189 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 PIGMQ9H3S5 423 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 REEP1Q9H902 201 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 S100A14Q9HCY8 104 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SLC7A10Q9NS82 523 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 GALNT8Q9NY28 637 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 COQ3Q9NZJ6 369 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 EMC3Q9P0I2 261 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IL20RAQ9UHF4 553 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 FOXD3Q9UJU5 478 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 NOSIPQ9Y314 301 aaKnown RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 EMC9Q9Y3B6 208 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ADAM18Q9Y3Q7 739 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IGKV1D-43A0A0B4J1Z2 117 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SLC35F4A4IF30 521 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ARRDC5A6NEK1 342 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 EEF1E1-BLOC1S5C9J1V9 151 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 IMPA2O14732 288 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 EEF1E1O43324 174 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 RNF13O43567 381 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 MITFO75030 526 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 MRPL33O75394 65 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 DEAF1O75398 565 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SMNDC1O75940 238 aaKnown RBP eCLIP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 CCNB2O95067 398 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 IGHMP01871 453 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 HEXAP06865 529 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ITGA5P08648 1049 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 COX5AP20674 150 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 IGHV1-2P23083 117 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 FASP25445 335 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 GTF2E2P29084 291 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 EPHA2P29317 976 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SLC9A3P48764 834 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ASCL1P50553 236 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 DAPP51397 102 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 BIDP55957 195 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ERVK-25P63136 954 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TSPAN31Q12999 210 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TSC22D1Q15714 1073 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ALG10Q5BKT4 473 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF362Q5T0B9 420 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 FBXW9Q5XUX1 488 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 FAHD1Q6P587 224 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SHQ1Q6PI26 577 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SEZ6L2Q6UXD5 910 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 CASP12Q6UXS9 341 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 CD300LDQ6UXZ3 194 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 MEX3BQ6ZN04 569 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF620Q6ZNG0 422 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 Q6ZT83 130 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SLC35D2Q76EJ3 337 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 AAED1Q7RTV5 226 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 UEVLDQ8IX04 471 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 C20orf196Q8IYI0 205 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ANKK1Q8NFD2 765 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 OR10G2Q8NGC3 310 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 OR6X1Q8NH79 312 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF519Q8TB69 540 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms