RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 RPL4P36578 427 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 FXYD6P3P58550 94 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 CTXN1P60606 82 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 FAM27E3Q08E93 113 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 ITGADQ13349 1161 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 MELKQ14680 651 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 SFRP5Q5T4F7 317 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 FAM205BPQ63HN1 556 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 CD300LDQ6UXZ3 194 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 STAC2Q6ZMT1 411 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF620Q6ZNG0 422 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 RASSF6Q6ZTQ3 369 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 CXorf67Q86X51 503 aaPredicted RBP16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 C20orf196Q8IYI0 205 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 CLDN22Q8N7P3 220 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 LRTOMTQ8WZ04 291 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 SPOCK3Q9BQ16 436 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 GPR52Q9Y2T5 361 aa16.75■□□□□ 0.27
CTDSP1-207ENST00000473420 COL12A1Q99715 3063 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF587BE7ETH6 402 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 RPL36A-HNRNPH2H7BZ11 118 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 KRT33AO76009 404 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 CD14P08571 375 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 ANXA8P13928 327 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 IGHV1-2P23083 117 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 RPL27P61353 136 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 FAPQ12884 760 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 COX10Q12887 443 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 RFX4Q33E94 735 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 ARMC4Q5T2S8 1044 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 HMBOX1Q6NT76 420 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 DPY19L2P2Q6ZN68 376 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 HIPK1Q86Z02 1210 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 DMRTC2Q8IXT2 367 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 GPR137CQ8N3F9 429 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF566Q969W8 418 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 CENPNQ96H22 339 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 FEVQ99581 238 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 USB1Q9BQ65 265 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 KATNB1Q9BVA0 655 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 POLDIP3Q9BY77 421 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 OR52D1Q9H346 318 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 S100A14Q9HCY8 104 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 B3GAT2Q9NPZ5 323 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 NRIP3Q9NQ35 241 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 TAS2R16Q9NYV7 291 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF346Q9UL40 294 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 CDH10Q9Y6N8 788 aa16.74■□□□□ 0.27
CTDSP1-207ENST00000473420 PTPN13Q12923 2485 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 UPK3AO75631 287 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 IGHG1P01857 330 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 PGA4P0DJD7 388 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 PGA3P0DJD8 388 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 APEHP13798 732 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 PPP3CBP16298 524 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 MPGP29372 298 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 SLC6A6P31641 620 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 CCKARP32238 428 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 CAMK2DQ13557 499 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 STK11Q15831 433 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 SP5Q6BEB4 398 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 THSD4Q6ZMP0 1018 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 IGFN1Q86VF2 1251 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 WDFY1Q8IWB7 410 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 SVOPLQ8N434 492 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF433Q8N7K0 673 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 STEAP2Q8NFT2 490 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 DNAJC9Q8WXX5 260 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 KISS1RQ969F8 398 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 TMEM54Q969K7 222 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 GTPBP3Q969Y2 492 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 ALKBH3Q96Q83 286 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 TSPAN32Q96QS1 320 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 NIPSNAP1Q9BPW8 284 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 IL20Q9NYY1 176 aa16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 UTP20O75691 2785 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-207ENST00000473420 BAHCC1Q9P281 2608 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 A6NIZ1 184 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 ITGA5P08648 1049 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 NR2C1P13056 603 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 ACADSP16219 412 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 CSNK1A1P48729 337 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 RPS6KA3P51812 740 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 SH3BGRP55822 239 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 RAP1BP61224 184 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 RAP1AP62834 184 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 HIST3H3Q16695 136 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 CARD17Q5XLA6 110 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 GPR139Q6DWJ6 353 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 MEX3BQ6ZN04 569 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 BHLHA15Q7RTS1 189 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 FAM122BQ7Z309 247 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 AMIGO2Q86SJ2 522 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 HS3ST5Q8IZT8 346 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 C1orf162Q8NEQ5 155 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 NOXO1Q8NFA2 376 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 OR6N1Q8NGY5 312 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF519Q8TB69 540 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 FNDC8Q8TC99 324 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 STMN2Q93045 179 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms