RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 EXD2Q9NVH0 621 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 COL5A3P25940 1745 aaPredicted RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 RASGRF2O14827 1237 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 XPO1O14980 1071 aaKnown RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 LRATO95237 230 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 NT5EP21589 574 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 CXCL12P48061 93 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 ARG2P78540 354 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 ADARB1P78563 741 aaKnown RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 AQP6Q13520 282 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 PIGHQ14442 188 aaPredicted RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 GINS1Q14691 196 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 POU2AF1Q16633 256 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 BEND3Q5T5X7 828 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 TPGS2Q68CL5 300 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 ERASQ7Z444 233 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 KIAA1328Q86T90 577 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 LINC01560Q8TB33 94 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 GEMIN6Q8WXD5 167 aaKnown RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 TM4SF18Q96CE8 201 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 SH3YL1Q96HL8 342 aaPredicted RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 SAMD8Q96LT4 415 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 GABARAPL3Q9BY60 117 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 GBA3Q9H227 469 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 GIN1Q9NXP7 522 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 SPASTQ9UBP0 616 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 CDH9Q9ULB4 789 aa0.93□□□□□ -2.26
SSB-208ENST00000468600 PACSIN2Q9UNF0 486 aaPredicted RBP0.93□□□□□ -2.26
SSB-208ENST00000468600 CENPJQ9HC77 1338 aaPredicted RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 CCER2I3L3R5 266 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 RHOBTB1O94844 696 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 YIF1AO95070 293 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 IGLV6-57P01721 117 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 GAPDHP04406 335 aaKnown RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 HLA-DPA1P20036 260 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 CSNK1A1P48729 337 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 CRYBB1P53674 252 aaPredicted RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 RPS11P62280 158 aaKnown RBP eCLIP0.92□□□□□ -2.26
SSB-208ENST00000468600 ERVK-25P63136 954 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 RPS21P63220 83 aaKnown RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 ZNF235Q14590 738 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 PGAP1Q75T13 922 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 ACOT1Q86TX2 421 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 APCDD1LQ8NCL9 501 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 ABHD3Q8WU67 409 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 FAM3CQ92520 227 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 C7orf34Q96L11 122 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 STACQ99469 402 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 TUBGCP2Q9BSJ2 902 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 ANGPTL4Q9BY76 406 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 RAB34Q9BZG1 259 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 DDX19AQ9NUU7 478 aaKnown RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 THUMPD1Q9NXG2 353 aaKnown RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 HOXC10Q9NYD6 342 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 DHCR7Q9UBM7 475 aaKnown RBP0.92□□□□□ -2.26
SSB-208ENST00000468600 PSG8Q9UQ74 426 aa0.92□□□□□ -2.26
SSB-208ENST00000468600 A0A0U1RQV1 116 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 FAM170AA1A519 330 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 BPY2O14599 106 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 HLA-DQA1P01909 254 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 OPN1MWP04001 364 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 OPN1MW2P0DN77 364 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 OPN1MW3P0DN78 364 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 ETS1P14921 441 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 DNAJB1P25685 340 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 IL12AP29459 219 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 P2RY1P47900 373 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 TNFRSF9Q07011 255 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 OXA1LQ15070 435 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 ZNF493Q6ZR52 646 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 NCCRP1Q6ZVX7 275 aaPredicted RBP0.91□□□□□ -2.26
SSB-208ENST00000468600 ABHD13Q7L211 337 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 SYT14Q8NB59 555 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 C15orf40Q8WUR7 153 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 OXGR1Q96P68 337 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 UGT1A7Q9HAW7 530 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 UGT1A10Q9HAW8 530 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 UGT1A8Q9HAW9 530 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 LY9Q9HBG7 655 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 SLC17A5Q9NRA2 495 aa0.91□□□□□ -2.26
SSB-208ENST00000468600 COL11A1P12107 1806 aaPredicted RBP0.9□□□□□ -2.27
SSB-208ENST00000468600 A0A1B0GVI7 797 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 KMOO15229 486 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 TBX19O60806 448 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 GCM2O75603 506 aaPredicted RBP0.9□□□□□ -2.27
SSB-208ENST00000468600 UPK3AO75631 287 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 GABARAPO95166 117 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 APCSP02743 223 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 ACADVLP49748 655 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 CCR8P51685 355 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 CDH4P55283 916 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 PDK1Q15118 436 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 PON3Q15166 354 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 SLC15A2Q16348 729 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 ZFP1Q6P2D0 407 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 UTS2BQ765I0 119 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 FNDC5Q8NAU1 212 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 STXBP6Q8NFX7 210 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 OR9A2Q8NGT5 310 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 CREB3L1Q96BA8 519 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms