RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MEGF6O75095 1541 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 NSD2O96028 1365 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 PDS5BQ9NTI5 1447 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 WI2-2373I1.2A0A1W2PRP0 233 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 SMCO3A2RU48 225 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 NKX2-6A6NCS4 301 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 C9JVG2 144 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 H3BNH8 94 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 EIF3GO75821 320 aaKnown RBP eCLIP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 GIPP09681 153 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 CT62P0C5K7 136 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 DUX4L4P0CJ87 422 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 NR2C1P13056 603 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF24P17028 368 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF43P17038 809 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCNE1P24864 410 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 OTX1P32242 354 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 FOXN2P32314 431 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 BTCP35070 178 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 RORAP35398 523 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 SLC26A3P40879 764 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 GPX6P59796 221 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 ENPEPQ07075 957 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 SRSF5Q13243 272 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 KIAA0087Q14695 138 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 RCN1Q15293 331 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 MPPED2Q15777 294 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 LRRC10Q5BKY1 277 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 COX15Q7KZN9 410 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZADH2Q8N4Q0 377 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 B3GNT7Q8NFL0 401 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 NPBQ8NG41 125 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 OR4F15Q8NGB8 312 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF578Q96N58 590 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 TSNARE1Q96NA8 513 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 NXF3Q9H4D5 531 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 VPS37BQ9H9H4 285 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 RAB20Q9NX57 234 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 NYAP2Q9P242 653 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 GNPTGQ9UJJ9 305 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 PACSIN2Q9UNF0 486 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 CACNG2Q9Y698 323 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 MSH6P52701 1360 aa2.96□□□□□ -1.94
CDC42BPA-211ENST00000466538 A0A0G2JLM5 398 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 TRBV11-1A0A0K0K1C0 115 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 PINLYPA6NC86 204 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 ERVV-1B6SEH8 477 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 SGK1O00141 431 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 PEX7O00628 323 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 GOSR2O14653 212 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 INSP01308 110 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 KRT14P02533 472 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 ALDOBP05062 364 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 PNMA6AP0CW24 399 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 TOP1P11387 765 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 DRD3P35462 400 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 SUB1P53999 127 aaKnown RBP eCLIP2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 ACVR1Q04771 509 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 FZD2Q14332 565 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 C2orf83Q53S99 150 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 HSP90AB3PQ58FF7 597 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 COA6Q5JTJ3 125 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 CNIH2Q6PI25 160 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 CERS6Q6ZMG9 384 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 ACP7Q6ZNF0 438 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 TMEM61Q8N0U2 210 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 Q8N7P7 452 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 RHEBL1Q8TAI7 183 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 BLOC1S5Q8TDH9 187 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 FAM210BQ96KR6 192 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 OR2M2Q96R28 347 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 CHP1Q99653 195 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 HES7Q9BYE0 225 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 RACGAP1Q9H0H5 632 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 NEK6Q9HC98 313 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF225Q9UK10 706 aa2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 PHF3Q92576 2039 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-211ENST00000466538 RLFQ13129 1914 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 IGKV6D-41A0A0C4DH26 115 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 XKRYO14609 159 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 MRPS12O15235 138 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 RNF13O43567 381 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF861PO60384 105 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 TNFSF13O75888 250 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 GKN3PP0CG01 181 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 SMIM10L1P0DMW3 83 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 ACLYP53396 1101 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 CDH6P55285 790 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 KRTAP10-3P60369 221 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCNA1P78396 465 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 AQP6Q13520 282 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 RFX4Q33E94 735 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 TMEM255AQ5JRV8 349 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 PRAMEF20Q5VT98 475 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 C6orf120Q7Z4R8 191 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 THOC6Q86W42 341 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 PUSL1Q8N0Z8 303 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 GTPBP8Q8N3Z3 284 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms