RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 NEURL3Q96EH8 262 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 TM2D3Q9BRN9 247 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 TUBGCP2Q9BSJ2 902 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 GABARAPL3Q9BY60 117 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 MRPL13Q9BYD1 178 aaKnown RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 RAB34Q9BZG1 259 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 SYNDIG1Q9H7V2 258 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 EXD2Q9NVH0 621 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 KLHL28Q9NXS3 571 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PACSIN2Q9UNF0 486 aaPredicted RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 NCAPD2Q15021 1401 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 RP2O75695 350 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 GABARAPO95166 117 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CD74P04233 296 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 BCHEP06276 602 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PCMT1P22061 227 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 IL12AP29459 219 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 SOX6P35712 828 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CXCL12P48061 93 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CSNK1A1P48729 337 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 NCBP2P52298 156 aaKnown RBP eCLIP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 KRTAP12-1P59990 96 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 RPS11P62280 158 aaKnown RBP eCLIP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PDIA2Q13087 525 aaKnown RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PRPSAP1Q14558 356 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 BEND3Q5T5X7 828 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 TPGS2Q68CL5 300 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 ZNF493Q6ZR52 646 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 LINC00173Q6ZV60 143 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PGAP1Q75T13 922 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 UTS2BQ765I0 119 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 ERASQ7Z444 233 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 ST20-AS1Q8NBB2 130 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 NOXO1Q8NFA2 376 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 STXBP6Q8NFX7 210 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 OR9A2Q8NGT5 310 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 LINC01560Q8TB33 94 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 C17orf50Q8WW18 174 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 C7orf34Q96L11 122 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 SAMD8Q96LT4 415 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 ACAT2Q9BWD1 397 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 PARP12Q9H0J9 701 aaKnown RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 UBE2ZQ9H832 354 aaPredicted RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 DDX19AQ9NUU7 478 aaKnown RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 GIN1Q9NXP7 522 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 SPASTQ9UBP0 616 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CDH9Q9ULB4 789 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 ADAMTS13Q76LX8 1427 aa0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CENPJQ9HC77 1338 aaPredicted RBP0.62□□□□□ -2.31
PTPN22-203ENST00000460620 CEMIPQ8WUJ3 1361 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 ZSWIM8A7E2V4 1837 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 IGHV3OR16-8A0A075B7F1 116 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 UBXN8O00124 270 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 IGLV6-57P01721 117 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 OPN1MWP04001 364 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 GAPDHP04406 335 aaKnown RBP0.61□□□□□ -2.31
PTPN22-203ENST00000460620 OPN1MW2P0DN77 364 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 OPN1MW3P0DN78 364 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 ETS1P14921 441 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 FUT1P19526 365 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 NT5EP21589 574 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 OXA1LQ15070 435 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 POU2AF1Q16633 256 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 KRTAP21-3Q3LHN1 58 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 CARD16Q5EG05 197 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 RAET1GQ6H3X3 334 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 PEX26Q7Z412 305 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 PLA2G4DQ86XP0 818 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 APCDD1LQ8NCL9 501 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 Q8NDZ9 215 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 ABHD3Q8WU67 409 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 STACQ99469 402 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 MRPL47Q9HD33 250 aaKnown RBP0.61□□□□□ -2.31
PTPN22-203ENST00000460620 SLC17A5Q9NRA2 495 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 THUMPD1Q9NXG2 353 aaKnown RBP0.61□□□□□ -2.31
PTPN22-203ENST00000460620 HOXC10Q9NYD6 342 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 AHDC1Q5TGY3 1603 aaPredicted RBP0.61□□□□□ -2.31
PTPN22-203ENST00000460620 SORL1Q92673 2214 aa0.61□□□□□ -2.31
PTPN22-203ENST00000460620 F5H6K3 240 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 BPY2O14599 106 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 UPK3AO75631 287 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 RHOBTB1O94844 696 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 TGFAP01135 160 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 HLA-DQA1P01909 254 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 APCSP02743 223 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 HLA-DPB1P04440 258 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ARL14EPLP0DKL9 152 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 TNNI3P19429 210 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 IMPDH1P20839 514 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 DCKP27707 260 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 P2RY1P47900 373 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CCR8P51685 355 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CDH4P55283 916 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 RPS21P63220 83 aaKnown RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ADARB1P78563 741 aaKnown RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 KLRC3Q07444 240 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ZNF235Q14590 738 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 PDK1Q15118 436 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 RBMY1FQ15415 496 aaKnown RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 SLC15A2Q16348 729 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms