RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 BVESQ8NE79 360 aa19.1■□□□□ 0.65
CTCF-202ENST00000401394 RAB7BQ96AH8 199 aa19.1■□□□□ 0.65
CTCF-202ENST00000401394 ANKRD9Q96BM1 317 aaPredicted RBP19.1■□□□□ 0.65
CTCF-202ENST00000401394 SEC22AQ96IW7 307 aa19.1■□□□□ 0.65
CTCF-202ENST00000401394 PBX4Q9BYU1 374 aa19.1■□□□□ 0.65
CTCF-202ENST00000401394 MRTO4Q9UKD2 239 aaKnown RBP19.1■□□□□ 0.65
CTCF-202ENST00000401394 PTPRSQ13332 1948 aa19.1■□□□□ 0.65
CTCF-202ENST00000401394 ASCC3Q8N3C0 2202 aaKnown RBP19.09■□□□□ 0.65
CTCF-202ENST00000401394 PRR19A6NJB7 356 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 A8MXK9 166 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 OR10H2O60403 315 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 PRKACAP17612 351 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 RAP2BP61225 183 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 CBLN3Q6UW01 205 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 NPSR1Q6W5P4 371 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 NUDT18Q6ZVK8 323 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 SPICQ8N5J4 248 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 PLPP7Q8NBV4 271 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 OR5AK2Q8NH90 309 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 ZNF75AQ96N20 296 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 SLC6A5Q9Y345 797 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 TYRP1P17643 537 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 HTRA4P83105 476 aaPredicted RBP19.09■□□□□ 0.65
CTCF-202ENST00000401394 PDGFRLQ15198 375 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 ETFDHQ16134 617 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 FAM122CQ6P4D5 195 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 LRRTM1Q86UE6 522 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 OR2AK2Q8NG84 335 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 MRPS24Q96EL2 167 aaKnown RBP19.09■□□□□ 0.65
CTCF-202ENST00000401394 RAB11FIP5Q9BXF6 653 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 EVA1AQ9H8M9 152 aa19.09■□□□□ 0.65
CTCF-202ENST00000401394 PRAF2O60831 178 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 AKR7A3O95154 331 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 ECDO95905 644 aaPredicted RBP19.08■□□□□ 0.65
CTCF-202ENST00000401394 BTG2P78543 158 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 POU4F2Q12837 409 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 ELFN2Q5R3F8 820 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 MDGA2Q7Z553 956 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 SLC2A12Q8TD20 617 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 MIB2Q96AX9 1013 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 TM4SF19Q96DZ7 209 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 RXFP3Q9NSD7 469 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 SLC22A13Q9Y226 551 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 CEP290O15078 2479 aa19.08■□□□□ 0.65
CTCF-202ENST00000401394 GLSO94925 669 aaPredicted RBP19.08■□□□□ 0.64
CTCF-202ENST00000401394 ANXA2P07355 339 aaKnown RBP19.08■□□□□ 0.64
CTCF-202ENST00000401394 ITGA5P08648 1049 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 PPP3CBP16298 524 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 OR6N2Q8NGY6 317 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 PNPLA2Q96AD5 504 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 PAWRQ96IZ0 340 aaKnown RBP19.08■□□□□ 0.64
CTCF-202ENST00000401394 FAM60AQ9NP50 221 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 HRH3Q9Y5N1 445 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 ACOT7O00154 380 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 TFAP2EQ6VUC0 442 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 NARS2Q96I59 477 aaKnown RBP19.08■□□□□ 0.64
CTCF-202ENST00000401394 MFFQ9GZY8 342 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 KIR3DX1Q9H7L2 352 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 PFDN2Q9UHV9 154 aa19.08■□□□□ 0.64
CTCF-202ENST00000401394 RBBP9O75884 186 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 CELA2BP08218 269 aaPredicted RBP19.07■□□□□ 0.64
CTCF-202ENST00000401394 MAP3K8P41279 467 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 GAS6Q14393 721 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 OLFML2AQ68BL7 652 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 POMGNT2Q8NAT1 580 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 SCARB1Q8WTV0 552 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 LMAN2LQ9H0V9 348 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 BAIAP2Q9UQB8 552 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 IGKV1D-42A0A075B6H8 117 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 F5H5P2 479 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 WNT11O96014 354 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 CPN1P15169 458 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 TSFMP43897 325 aaKnown RBP19.07■□□□□ 0.64
CTCF-202ENST00000401394 AP3S2P59780 193 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 ZNF684Q5T5D7 378 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 NKAIN2Q5VXU1 208 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 PARGQ86W56 976 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 PRSS35Q8N3Z0 413 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 LSM14AQ8ND56 463 aaKnown RBP19.07■□□□□ 0.64
CTCF-202ENST00000401394 KXD1Q9BQD3 176 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 TCEAL2Q9H3H9 227 aaPredicted RBP19.07■□□□□ 0.64
CTCF-202ENST00000401394 ZNF337Q9Y3M9 751 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 COLEC10Q9Y6Z7 277 aa19.07■□□□□ 0.64
CTCF-202ENST00000401394 TDRD6O60522 2096 aaKnown RBP19.06■□□□□ 0.64
CTCF-202ENST00000401394 ALOX12BO75342 701 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 PLGP00747 810 aaPredicted RBP19.06■□□□□ 0.64
CTCF-202ENST00000401394 FGF2P09038 288 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 DHODHQ02127 395 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 GK2Q14410 553 aaPredicted RBP19.06■□□□□ 0.64
CTCF-202ENST00000401394 Q499Y3 187 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 C1QL3Q5VWW1 255 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 LRRN1Q6UXK5 716 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 ZNF676Q8N7Q3 588 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 TOX2Q96NM4 488 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 EXO5Q9H790 373 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 MKKSQ9NPJ1 570 aaPredicted RBP19.06■□□□□ 0.64
CTCF-202ENST00000401394 TRAV14DV4A0A0A6YYC5 116 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 SDC3O75056 442 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 ITGA10O75578 1167 aa19.06■□□□□ 0.64
CTCF-202ENST00000401394 CSTAP01040 98 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms