RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TSSK2Q96PF2 358 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 H7C1C5 153 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 SULT2B1O00204 365 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 TNFSF11O14788 317 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 TFP02787 698 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 EIF2S3P41091 472 aaKnown RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 LHX2P50458 406 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 LCN6P62502 163 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 POU4F3Q15319 338 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 KLHL12Q53G59 568 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 TRILQ7L0X0 811 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 ANKRD13BQ86YJ7 626 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 OR51G2Q8NGK0 314 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 OTULINQ96BN8 352 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 OPALINQ96PE5 141 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 FUNDC2Q9BWH2 189 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 ACKR4Q9NPB9 350 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 RPRD1BQ9NQG5 326 aaKnown RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 MOKQ9UQ07 419 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 A0A1W2PRG6 482 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 SLC22A23A1A5C7 686 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 GJE1A6NN92 205 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 OR6A2O95222 327 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 IFNGR1P15260 489 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 TMBIM6P55061 237 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 POU4F2Q12837 409 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 MELKQ14680 651 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 NMD3Q96D46 503 aaKnown RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 ZDHHC11Q9H8X9 412 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 TNFRSF10DQ9UBN6 386 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 NOX1Q9Y5S8 564 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 IGLV1-36A0A0B4J1U3 117 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 SEC14L5O43304 696 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 GTF2E2P29084 291 aaKnown RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF85Q03923 595 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 GPR107Q5VW38 600 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 CLVS1Q8IUQ0 354 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 GHDCQ8N2G8 530 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 DTNBP1Q96EV8 351 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
TRIM39-204ENST00000396548 RSL24D1Q9UHA3 163 aaKnown RBP11.36□□□□□ -0.59
TRIM39-204ENST00000396548 ARHGEF9O43307 516 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TRMUO75648 421 aaKnown RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TRAPPC6AO75865 159 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 PTGS2P35354 604 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 DAP3P51398 398 aaKnown RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 CLDN18P56856 261 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 RAC3P60763 192 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ACSM1Q08AH1 577 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TOMM20Q15388 145 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 CTF1Q16619 201 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TIGD6Q17RP2 521 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 FAM205BPQ63HN1 556 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ESPNLQ6ZVH7 1005 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ATCAYQ86WG3 371 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 POMGNT2Q8NAT1 580 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SMPDL3BQ92485 455 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 RACGAP1Q9H0H5 632 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SYT4Q9H2B2 425 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ISYNA1Q9NPH2 558 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 INPP5EQ9NRR6 644 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ENPP5Q9UJA9 477 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 RASD1Q9Y272 281 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 FAM166BA8MTA8 275 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SMAD9O15198 467 aaKnown RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 AHCYL1O43865 530 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 EIF1BO60739 113 aaKnown RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SCG5P05408 212 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 STARP49675 285 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SPHARQ15513 63 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SSX1Q16384 188 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TIGD4Q8IY51 512 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 OR51L1Q8NGJ5 315 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SMAP2Q8WU79 429 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 TM9SF4Q92544 642 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 SFXN2Q96NB2 322 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ARHGAP9Q9BRR9 750 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 NUAK2Q9H093 628 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 MED29Q9NX70 200 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 B9D1Q9UPM9 204 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 PCDHGA9Q9Y5G4 932 aaKnown RBP11.35□□□□□ -0.59
TRIM39-204ENST00000396548 FKBP7Q9Y680 259 aa11.35□□□□□ -0.59
TRIM39-204ENST00000396548 A6NIZ1 184 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 H3BMQ9 156 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms