RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 OR6V1Q8N148 313 aa12.65□□□□□ -0.39
SNCA-204ENST00000394989 APCDD1LQ8NCL9 501 aa12.65□□□□□ -0.39
SNCA-204ENST00000394989 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.39
SNCA-204ENST00000394989 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.39
SNCA-204ENST00000394989 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.39
SNCA-204ENST00000394989 TNRC6BQ9UPQ9 1833 aaKnown RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 NUDT14O95848 222 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ZMYND11Q15326 602 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 RNASE12Q5GAN4 147 aaKnown RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 TRIQKQ629K1 86 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ASB18Q6ZVZ8 466 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 LRRC28Q86X40 367 aaPredicted RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ZFAND1Q8TCF1 268 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 WACQ9BTA9 647 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 SRA1Q9HD15 236 aaKnown RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 PRDM6Q9NQX0 595 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ZNF222Q9UK12 451 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 SLC6A5Q9Y345 797 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 IGLV3-12A0A075B6K2 115 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 CPED1A4D0V7 1026 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 B8ZZF3 427 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 TOX3O15405 576 aaPredicted RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 CDC40O60508 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNCA-204ENST00000394989 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 SYPP08247 313 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 UCHL1P09936 223 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 FAM157BP0CG42 384 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 RAB3BP20337 219 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 CXCR1P25024 350 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 EDNRAP25101 427 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 DHPSP49366 369 aaPredicted RBP12.64□□□□□ -0.39
SNCA-204ENST00000394989 RNF4P78317 190 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 LYSMD4Q5XG99 296 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 OR6C1Q96RD1 312 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
SNCA-204ENST00000394989 TRAV1-2A0A0B4J238 106 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 CD1AP06126 327 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
SNCA-204ENST00000394989 SAP25Q8TEE9 199 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ADAM30Q9UKF2 790 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 A0A0B4J203 849 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 LANCL1O43813 399 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 NPIPB7O75200 414 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ATF1P18846 271 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 MAGEB1P43366 347 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 RGP1Q92546 391 aaPredicted RBP12.63□□□□□ -0.39
SNCA-204ENST00000394989 SEMA4CQ9C0C4 833 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 BEX1Q9HBH7 125 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 GLTPQ9NZD2 209 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 SRPK3Q9UPE1 567 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 CPAMD8Q8IZJ3 1885 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 TMEM72A0PK05 275 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 PIN1P1O15428 100 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 GPANK1O95872 356 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 SERPINA3P01011 423 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 PGCP20142 388 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 NPR2P20594 1047 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 C19orf57Q0VDD7 668 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 EMC4Q5J8M3 183 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 SLC16A9Q7RTY1 509 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ADGRG3Q86Y34 549 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
SNCA-204ENST00000394989 GPR119Q8TDV5 335 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 DUSP19Q8WTR2 217 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 RELTQ969Z4 430 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 NPAS1Q99742 590 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 SYT4Q9H2B2 425 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ZCCHC4Q9H5U6 513 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 ING3Q9NXR8 418 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
SNCA-204ENST00000394989 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 FABP7O15540 132 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 TOXO94900 526 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ZFPL1O95159 310 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 PDGFAP04085 211 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 EPXP11678 715 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 FOSL2P15408 326 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 PNLIPP16233 465 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 P2RX1P51575 399 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 CCL7P80098 99 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 HSF2Q03933 536 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 CBFBQ13951 182 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms