RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
SNCG-202ENST00000372017 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
SNCG-202ENST00000372017 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
SNCG-202ENST00000372017 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 TCRBV3S1A0A5B6 114 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 CIB4A0PJX0 185 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ZNF503-AS2A6NEH8 195 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 AQP12BA6NM10 295 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 RPL36A-HNRNPH2H7BZ11 118 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 M0R3G1 203 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 CASKO14936 926 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 CLOCKO15516 846 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 PTP4A3O75365 173 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 PLAUP00749 431 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ITGA2P17301 1181 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 CDH2P19022 906 aaPredicted RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 HMGA2P52926 109 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ROR2Q01974 943 aaKnown RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 ACKR1Q16570 336 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 HIKESHIQ53FT3 197 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 TIMM23BQ5SRD1 257 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ZER1Q7Z7L7 766 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 AQP12AQ8IXF9 295 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 OR1K1Q8NGR3 316 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 OR52N5Q8NH56 324 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 OR6X1Q8NH79 312 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 HSD17B8Q92506 261 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 TMEM54Q969K7 222 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 UTP4Q969X6 686 aaKnown RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 PIK3IP1Q96FE7 263 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 BOD1Q96IK1 185 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 LRR1Q96L50 414 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ALPK1Q96QP1 1244 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 POLDIP3Q9BY77 421 aaKnown RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 INIPQ9NRY2 104 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ZNF226Q9NYT6 803 aa11.03□□□□□ -0.64
SNCG-202ENST00000372017 ZNF346Q9UL40 294 aaKnown RBP11.03□□□□□ -0.64
SNCG-202ENST00000372017 A0A096LPE4 126 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 A0A1W2PPZ6 126 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 HTR3EA5X5Y0 456 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 DPRXA6NFQ7 191 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ZNF726A6NNF4 738 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 MCIDASD6RGH6 385 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ZNF587BE7ETH6 402 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ATP5HO75947 161 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 SEC14L2O76054 403 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 PGA4P0DJD7 388 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 PGA3P0DJD8 388 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 SAGP10523 405 aaPredicted RBP11.02□□□□□ -0.65
SNCG-202ENST00000372017 ARF1P84077 181 aaKnown RBP11.02□□□□□ -0.65
SNCG-202ENST00000372017 FLOT2Q14254 428 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 PPA1Q15181 289 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 CEACAM16Q2WEN9 425 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ALG10Q5BKT4 473 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ARMC4Q5T2S8 1044 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 LRFN4Q6PJG9 635 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ASRGL1Q7L266 308 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 OAFQ86UD1 273 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 GPR137CQ8N3F9 429 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 CLDN22Q8N7P3 220 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 HDAC2Q92769 488 aaKnown RBP11.02□□□□□ -0.65
SNCG-202ENST00000372017 BCL2L2Q92843 193 aaPredicted RBP11.02□□□□□ -0.65
SNCG-202ENST00000372017 PLPPR2Q96GM1 343 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 LRGUKQ96M69 825 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 TSPAN32Q96QS1 320 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 MRPL13Q9BYD1 178 aaKnown RBP11.02□□□□□ -0.65
SNCG-202ENST00000372017 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 IL20RAQ9UHF4 553 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 SIGLEC7Q9Y286 467 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 ABCA4P78363 2273 aa11.02□□□□□ -0.65
SNCG-202ENST00000372017 IGKV1D-43A0A0B4J1Z2 117 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 DHRS12A0PJE2 317 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 OR6C65A6NJZ3 312 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 TRMUO75648 421 aaKnown RBP11.01□□□□□ -0.65
SNCG-202ENST00000372017 KRT33AO76009 404 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 BCL10O95999 233 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 IGHMP01871 453 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 RAP2AP10114 183 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 SLC9A3P48764 834 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 IST1P53990 364 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 CTXN1P60606 82 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 TUBA1BP68363 451 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 TUBA4AP68366 448 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 MYBPC1Q00872 1141 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 CHRNB3Q05901 458 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 HIST3H3Q16695 136 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 TBRG1Q3YBR2 411 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 ZBED5Q49AG3 693 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 FAM98BQ52LJ0 330 aaKnown RBP11.01□□□□□ -0.65
SNCG-202ENST00000372017 NCMAPQ5T1S8 102 aa11.01□□□□□ -0.65
SNCG-202ENST00000372017 OR7E24Q6IFN5 339 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms