RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 KLHDC2Q9Y2U9 406 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 ARPC4-TTLL3A0A0A6YYG9 625 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 TRABD2BA6NFA1 517 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 SULT1B1O43704 296 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 SCO2O43819 266 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 RAF1P04049 648 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 SNTB2Q13425 540 aaKnown RBP20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 BCL2L15Q5TBC7 163 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 FAM199XQ6PEV8 388 aaPredicted RBP20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 CDH24Q86UP0 819 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 EID2Q8N6I1 236 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 PLPP5Q8NEB5 264 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 INTS14Q96SY0 518 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 TAS2R5Q9NYW4 299 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 MKL2Q9ULH7 1088 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 TRBV5-5A0A0J9YX44 114 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 RAB40ALP0C0E4 278 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 DPP4P27487 766 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 ABCD3P28288 659 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 P2RX1P51575 399 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 POLR2HP52434 150 aaKnown RBP20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 BLVRAP53004 296 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 SGCBQ16585 318 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 HES5Q5TA89 166 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 WDR74Q6RFH5 385 aaPredicted RBP20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 OR6N2Q8NGY6 317 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 C15orf40Q8WUR7 153 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 RAB40AQ8WXH6 277 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 KLHDC3Q9BQ90 382 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 VN1R1Q9GZP7 353 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 COMMD4Q9H0A8 199 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 ANKRD10Q9NXR5 420 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 STMN3Q9NZ72 180 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 IKZF2Q9UKS7 526 aa20.17■□□□□ 0.82
NKX2-1-201ENST00000354822 COL5A1P20908 1838 aaPredicted RBP20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 EFNA3P52797 238 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 TOMM34Q15785 309 aaPredicted RBP20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 STAC2Q6ZMT1 411 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF441Q8N8Z8 693 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 LILRB4Q8NHJ6 448 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 DNASE2BQ8WZ79 361 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 HSD17B8Q92506 261 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 THRSPQ92748 146 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 S100A16Q96FQ6 103 aaKnown RBP20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 OR2M2Q96R28 347 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 SLC25A18Q9H1K4 315 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 SYT4Q9H2B2 425 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 GHITMQ9H3K2 345 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 PLEKHA1Q9HB21 404 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 MRPL39Q9NYK5 338 aaKnown RBP20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 FKBP7Q9Y680 259 aa20.16■□□□□ 0.82
NKX2-1-201ENST00000354822 NUP210LQ5VU65 1888 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 TVP23AA6NH52 213 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 TMEM212A6NML5 194 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 H7C1C5 153 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 ECDO95905 644 aaPredicted RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 STOMP27105 288 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 GIFP27352 417 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 AFF3P51826 1226 aaKnown RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 LCN6P62502 163 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 RASGEF1BQ0VAM2 473 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 KLF9Q13886 244 aaPredicted RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 FAM69AQ5T7M9 428 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 ESPNLQ6ZVH7 1005 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 METTL21AQ8WXB1 218 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 HYLS1Q96M11 299 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 TRAV6A0A075B6T7 132 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 A0A1W2PPC1 479 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 TPPPO94811 219 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 BCKDHBP21953 392 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 MRPS10P82664 201 aaKnown RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 C5orf46Q6UWT4 87 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 LRRN1Q6UXK5 716 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 FCRLAQ7L513 359 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 DPY19L4Q7Z388 723 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 THEM6Q8WUY1 208 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 NSMAFQ92636 917 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF501Q96CX3 271 aaPredicted RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 TSPAN10Q9H1Z9 355 aaPredicted RBP20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 LIN7BQ9HAP6 207 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 ETV7Q9Y603 341 aa20.15■□□□□ 0.82
NKX2-1-201ENST00000354822 EML5Q05BV3 1969 aa20.14■□□□□ 0.82
NKX2-1-201ENST00000354822 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 A8MVM7 634 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 GABARAPH6UMI1 98 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 FADS1O60427 444 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 AKR7A3O95154 331 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 EVI2BP34910 448 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 AP3S2P59780 193 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 POMZP3Q6PJE2 187 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 BTN2A1Q7KYR7 527 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 GRINAQ7Z429 371 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 PM20D2Q8IYS1 436 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 OR2G2Q8NGZ5 317 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 ZNF417Q8TAU3 575 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 CLDN23Q96B33 292 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 ORAI1Q96D31 301 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 FGF21Q9NSA1 209 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 TMED7-TICAM2A0A0A6YYA0 188 aa20.14■□□□□ 0.81
NKX2-1-201ENST00000354822 OR4C45A6NMZ5 311 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms