RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 MED13Q9UHV7 2174 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 TRIM64BA6NI03 449 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 KLRC4-KLRK1H3BQV0 150 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 H7C1C5 153 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 LINC01387J3KSC0 135 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 SLC22A1O15245 554 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 EIF1BO60739 113 aaKnown RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 ATE1O95260 518 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 LCN6P62502 163 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 MELKQ14680 651 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 CTF1Q16619 201 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 TIMM50Q3ZCQ8 353 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 SLC35D2Q76EJ3 337 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 UEVLDQ8IX04 471 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ASB10Q8WXI3 467 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 GATAD2BQ8WXI9 593 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 HAS2Q92819 552 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ZNF649Q9BS31 505 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ALG8Q9BVK2 526 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTN-201ENST00000348225 SYT4Q9H2B2 425 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ZNF552Q9H707 407 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 ZNF703Q9H7S9 590 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 SRA1Q9HD15 236 aaKnown RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 VSX1Q9NZR4 365 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 KLK13Q9UKR3 277 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 AQP7P3A6NL99 342 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 AIREO43918 545 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 OR2T7P0C7T2 308 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 HLA-DOBP13765 273 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 IFNGR1P15260 489 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 NR4A1P22736 598 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 PYCR1P32322 319 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 CAPZA2P47755 286 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 CENPAP49450 140 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 CCL11P51671 97 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 DBPQ10586 325 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 GALEQ14376 348 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 LINC01590Q5TEZ4 76 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 EEF1A1P5Q5VTE0 462 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ZNF322Q6U7Q0 402 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 HDDC2Q7Z4H3 204 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 PM20D2Q8IYS1 436 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 OR2T27Q8NH04 317 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 MYCBPQ99417 103 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 TBX5Q99593 518 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 ARHGAP9Q9BRR9 750 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 NAA11Q9BSU3 229 aaPredicted RBP16.74■□□□□ 0.27
PTN-201ENST00000348225 HES7Q9BYE0 225 aa16.74■□□□□ 0.27
PTN-201ENST00000348225 PTPRZ1P23471 2315 aaPredicted RBP16.73■□□□□ 0.27
PTN-201ENST00000348225 DNPH1O43598 174 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 AKAP8O43823 692 aaKnown RBP16.73■□□□□ 0.27
PTN-201ENST00000348225 GADD45AP24522 165 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 P2RY4P51582 365 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 BLVRAP53004 296 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 TMEM225Q6GV28 225 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 SLC35F2Q8IXU6 374 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 OR6V1Q8N148 313 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 UFD1Q92890 307 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 ZHX1-C8orf76Q96EF9 292 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 MRPL48Q96GC5 212 aaKnown RBP16.73■□□□□ 0.27
PTN-201ENST00000348225 OXGR1Q96P68 337 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 TSSK2Q96PF2 358 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 RASD1Q9Y272 281 aa16.73■□□□□ 0.27
PTN-201ENST00000348225 A0A1W2PPW3 197 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 SLC22A23A1A5C7 686 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 AHCYL1O43865 530 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 HPNP05981 417 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 CPEP16870 476 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 PCSK6P29122 969 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 CRABP1P29762 137 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 NAA10P41227 235 aaPredicted RBP16.72■□□□□ 0.27
PTN-201ENST00000348225 PLGLB1Q02325 96 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 NFATC3Q12968 1075 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 DOC2BQ14184 412 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 DEFB109BQ30KR1 87 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 WIPI1Q5MNZ9 446 aaPredicted RBP16.72■□□□□ 0.27
PTN-201ENST00000348225 DNM1P34Q6PK57 102 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 C19orf48Q6RUI8 117 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 GALNTL5Q7Z4T8 443 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 TMEM178AQ8NBL3 297 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 ZNF485Q8NCK3 441 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 SPRYD4Q8WW59 207 aaPredicted RBP16.72■□□□□ 0.27
PTN-201ENST00000348225 ZNRF4Q8WWF5 429 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 TTTY12Q9BZ98 90 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 NUAK2Q9H093 628 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 NDUFB11Q9NX14 153 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 B3GAT1Q9P2W7 334 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 NCKAP5O14513 1909 aa16.72■□□□□ 0.27
PTN-201ENST00000348225 LOC102725191A0A1B0GVB3 256 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 A0A1W2PQL4 384 aaPredicted RBP16.71■□□□□ 0.27
PTN-201ENST00000348225 FAM171A2A8MVW0 826 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 VAMP5O95183 116 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 TFP02787 698 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 MT-ND5P03915 603 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 POU3F2P20265 443 aaPredicted RBP16.71■□□□□ 0.27
PTN-201ENST00000348225 MEOX1P50221 254 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms