RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 BOD1L1Q8NFC6 3051 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 XKRYO14609 159 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 ARHGEF9O43307 516 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TRAF3IP2O43734 574 aaPredicted RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 MT-ND2P03891 347 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TFAP2AP05549 437 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 CLUP10909 449 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 SLC25A1P53007 311 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 MVKQ03426 396 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 DBPQ10586 325 aaPredicted RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TMED1Q13445 227 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 POU4F3Q15319 338 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 KLHL12Q53G59 568 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 SIAH3Q8IW03 269 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 EXD3Q8N9H8 876 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 KISS1RQ969F8 398 aaPredicted RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 CPNE4Q96A23 557 aaPredicted RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 LGALS12Q96DT0 336 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 RNFT2Q96EX2 444 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TEAD3Q99594 435 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TIMP4Q99727 224 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 CCDC90BQ9GZT6 254 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 TSPAN10Q9H1Z9 355 aaPredicted RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 EXO5Q9H790 373 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 MED29Q9NX70 200 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 SPRR3Q9UBC9 169 aa14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 WARS2Q9UGM6 360 aaKnown RBP14.59□□□□□ -0.07
CEACAM1-202ENST00000344391 DSPP15924 2871 aaKnown RBP14.58□□□□□ -0.07
CEACAM1-202ENST00000344391 A0A1B0GVC2 190 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 PRSS37A4D1T9 235 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 CCDC182A6NF36 153 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 A6NIZ1 184 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 SLC22A31A6NKX4 558 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 H7C1C5 153 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RENP00797 406 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 GYPBP06028 91 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 STSP08842 583 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 ZNF43P17038 809 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 C21orf33P30042 268 aaPredicted RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RAP1BP61224 184 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RPS3AP61247 264 aaKnown RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 LCN6P62502 163 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RAP1AP62834 184 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 SRYQ05066 204 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RUNX1T1Q06455 604 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RAB40BQ12829 278 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 C1DQ13901 141 aaKnown RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 INAQ16352 499 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 LINC00303Q3SY05 128 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 KLHL22Q53GT1 634 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 FAM205BPQ63HN1 556 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 WDFY1Q8IWB7 410 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 STX19Q8N4C7 294 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 ZNF845Q96IR2 970 aaPredicted RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 RPRD1BQ9NQG5 326 aaKnown RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 ASB6Q9NWX5 421 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 VSX1Q9NZR4 365 aaPredicted RBP14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 KLHL13Q9P2N7 655 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 SNX5Q9Y5X3 404 aa14.58□□□□□ -0.08
CEACAM1-202ENST00000344391 ZZEF1O43149 2961 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 ADRA2AP08913 450 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 CPN1P15169 458 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 SPI1P17947 270 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 BIDP55957 195 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 SLC17A1Q14916 467 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 B3GLCTQ6Y288 498 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 ZNRF4Q8WWF5 429 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 ROBO4Q8WZ75 1007 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 WDYHV1Q96HA8 205 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 TMEM80Q96HE8 168 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 SF3B5Q9BWJ5 86 aaKnown RBP14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 SYT4Q9H2B2 425 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 FGF20Q9NP95 211 aaPredicted RBP14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 PLSCR2Q9NRY7 297 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 PAQR5Q9NXK6 330 aaPredicted RBP14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 HAO2Q9NYQ3 351 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 TNFRSF10DQ9UBN6 386 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 EXOGQ9Y2C4 368 aaKnown RBP14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 PCDHGB1Q9Y5G3 927 aa14.57□□□□□ -0.08
CEACAM1-202ENST00000344391 IRGMA1A4Y4 181 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 SLC22A23A1A5C7 686 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 TMEM8BA6NDV4 472 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 WISP2O76076 250 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 PCMT1P22061 227 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 NR1H2P55055 460 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 RPS7P62081 194 aaKnown RBP14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 LGALS3BPQ08380 585 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 SLC35D3Q5M8T2 416 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 GTF2IRD2BQ6EKJ0 949 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 ABLIM2Q6H8Q1 611 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 B3GNT6Q6ZMB0 384 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 KCTD8Q6ZWB6 473 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 CREB3L2Q70SY1 520 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 GTF2IRD2Q86UP8 949 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 PM20D2Q8IYS1 436 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 OR9K2Q8NGE7 335 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 OR52I1Q8NGK6 324 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 TSSK2Q96PF2 358 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 KCNK17Q96T54 332 aa14.56□□□□□ -0.08
CEACAM1-202ENST00000344391 EMC6Q9BV81 110 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms