RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GINS4Q9BRT9 223 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 HES7Q9BYE0 225 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CNOT11Q9UKZ1 510 aaKnown RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ST14Q9Y5Y6 855 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CD8B2A6NJW9 211 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SHISA8B8ZZ34 492 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SLC1A7O00341 560 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CYR61O00622 381 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CBX7O95931 251 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CD8BP10966 210 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MSR1P21757 451 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 GALNSP34059 522 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 PSMB10P40306 273 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ATP1B3P54709 279 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 KIAA0040Q15053 153 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 PLET1Q6UQ28 207 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ATG5Q9H1Y0 275 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 NIPAL2Q9H841 368 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SMURF1Q9HCE7 757 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ABCD2Q9UBJ2 740 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 KCNE3Q9Y6H6 103 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 A0A096LPE4 126 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1W2PPZ6 126 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CDHR4A6H8M9 788 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MAP2K4P45985 399 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF117Q03924 483 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 KLRB1Q12918 225 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ACKR1Q16570 336 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 OGFRL1Q5TC84 451 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 RNF165Q6ZSG1 346 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 TRILQ7L0X0 811 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 KCTD20Q7Z5Y7 419 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SNX29P2Q8IUI4 249 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 AKAP1Q92667 903 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 DOCK6Q96HP0 2047 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 FNDC1Q4ZHG4 1894 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 OR8G3PP0DMU2 310 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ARR3P36575 388 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MAGEA2P43356 314 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CBLBQ13191 982 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 FZD5Q13467 585 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ADPRMQ3LIE5 342 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 RNF220Q5VTB9 566 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MRM1Q6IN84 353 aaKnown RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SLC7A13Q8TCU3 470 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MNTQ99583 582 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CLEC4MQ9H2X3 399 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MED20Q9H944 212 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 FOXJ2Q9P0K8 574 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 IL17BQ9UHF5 180 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SLCO1B1Q9Y6L6 691 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 TMEM72A0PK05 275 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 LRRC30A6NM36 301 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 SEC14L2O76054 403 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 GABRA2P47869 451 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 HNRNPFP52597 415 aaKnown RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 WNT4P56705 351 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 KIRREL2Q6UWL6 708 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 CROCCP3Q8IVE0 287 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TMEM99Q8N816 258 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 POLE4Q9NR33 117 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 INPP5EQ9NRR6 644 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 COA3Q9Y2R0 106 aaPredicted RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 SP1P08047 785 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 GSTT2P0CG29 244 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 SLC2A5P22732 501 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 DIO1P49895 249 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 RAB11BQ15907 218 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 SCGB2B2Q4G0G5 96 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF684Q5T5D7 378 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 GLB1L2Q8IW92 636 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TNFAIP8L1Q8WVP5 186 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 UBL7Q96S82 380 aaPredicted RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 UBQLN3Q9H347 655 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 WDR76Q9H967 626 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 ACOT13Q9NPJ3 140 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 MED29Q9NX70 200 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TUBA8Q9NY65 449 aaPredicted RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 KCNS2Q9ULS6 477 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TIMM10BQ9Y5J6 103 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 A0A087WUU8 490 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 METTL15A6NJ78 407 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 DBHP09172 617 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TMIGD3P0DMS9 266 aaPredicted RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 ETV5P41161 510 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 MAGEA5P43359 124 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 RAC1P63000 192 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 UBE3DQ7Z6J8 389 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 PTPMT1Q8WUK0 201 aaPredicted RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 FAM46BQ96A09 425 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 EXO1Q9UQ84 846 aaKnown RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 C1QAP02745 245 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF44P15621 663 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms