RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SDC3O75056 442 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 UTS2O95399 124 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 HPXP02790 462 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 CD14P08571 375 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 CCR5P51681 352 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 CAMK2DQ13557 499 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.73□□□□□ -0.53
HIF3A-204ENST00000300862 GSG1Q2KHT4 349 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 UBE2NLQ5JXB2 153 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 SLC35D3Q5M8T2 416 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 TTLL10Q6ZVT0 673 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 OR10AC1Q8NH08 325 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF563Q8TA94 476 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 SMIM4Q8WVI0 70 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 LRFN5Q96NI6 719 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 OR2M2Q96R28 347 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 ULBP3Q9BZM4 244 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 WDR76Q9H967 626 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 MMP25Q9NPA2 562 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 UBQLN4Q9NRR5 601 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 FRRS1LQ9P0K9 344 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 GMEB2Q9UKD1 530 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 IKZF2Q9UKS7 526 aa11.73□□□□□ -0.53
HIF3A-204ENST00000300862 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 C10orf142B7Z368 130 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 G3V3Q6 166 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GUSBP08236 651 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 DPP4P27487 766 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 TACR3P29371 465 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 BLKP51451 505 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 HSD17B7P56937 341 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 SKP1P63208 163 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
HIF3A-204ENST00000300862 TOMM34Q15785 309 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GRK1Q15835 563 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 DEFB133Q30KQ1 61 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 FNDC7Q5VTL7 733 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 SLC35F3Q8IY50 421 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 OR6V1Q8N148 313 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 LRRC75AQ8NAA5 344 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 NKX3-1Q99801 234 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-204ENST00000300862 DHCR7Q9UBM7 475 aaKnown RBP11.72□□□□□ -0.53
HIF3A-204ENST00000300862 HIF3AQ9Y2N7 669 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 RNF215Q9Y6U7 377 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 AIPO00170 330 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GPR171O14626 319 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF264O43296 627 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 SSNA1O43805 119 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GPRIN2O60269 458 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 TOXO94900 526 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 RRASP10301 218 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GABRA4P48169 554 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 SLC37A1P57057 533 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 HSF2Q03933 536 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 PLA2G7Q13093 441 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 C4orf46Q504U0 113 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 MESTQ5EB52 335 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-204ENST00000300862 LRRC69Q6ZNQ3 347 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 DPY19L4Q7Z388 723 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 LUZP2Q86TE4 346 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 OR51A4Q8NGJ6 313 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 OR6N2Q8NGY6 317 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 ADAMTS14Q8WXS8 1223 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 TAAR8Q969N4 342 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 OR10A4Q9H209 315 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GPR27Q9NS67 375 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 GRHPRQ9UBQ7 328 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 PRODH2Q9UF12 536 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 PLCL2Q9UPR0 1127 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 V9GY05 133 aa11.72□□□□□ -0.53
HIF3A-204ENST00000300862 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 ICOSLGO75144 302 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 UPK3AO75631 287 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 AKR7A3O95154 331 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 IFNA7P01567 189 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 TMIGD3P0DMS9 266 aaPredicted RBP11.71□□□□□ -0.53
HIF3A-204ENST00000300862 ADRA2CP18825 462 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 ITPKBP27987 946 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 SDHAP31040 664 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 FOXL2P58012 376 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 ZP1P60852 638 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 PUDPQ08623 228 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 HACD4Q5VWC8 232 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 GPX7Q96SL4 187 aaPredicted RBP11.71□□□□□ -0.53
HIF3A-204ENST00000300862 SYT4Q9H2B2 425 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 DLL4Q9NR61 685 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.53
HIF3A-204ENST00000300862 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.54
HIF3A-204ENST00000300862 H0YC42 278 aa11.71□□□□□ -0.54
HIF3A-204ENST00000300862 HCRTR2O43614 444 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms