RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 DUSP7Q16829 419 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 CNIH2Q6PI25 160 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 ESPNLQ6ZVH7 1005 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 PM20D2Q8IYS1 436 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR2A14Q96R47 310 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 NDRG3Q9UGV2 375 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 CDHR4A6H8M9 788 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 UBCP0CG48 685 aaKnown RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 HTR1FP30939 366 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 SPRED3Q2MJR0 410 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZNF385BQ569K4 471 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 ADGRF3Q8IZF5 1079 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 NICN1Q9BSH3 213 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 A8MV72 311 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 DOK2O60496 412 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 BOD1Q96IK1 185 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 HRASLS5Q96KN8 279 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 PCDHGA1Q9Y5H4 931 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 UPK1AO00322 258 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 GLCEO94923 617 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 CRHBPP24387 322 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 COX15Q7KZN9 410 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 SPRED1Q7Z699 444 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 MIB2Q96AX9 1013 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 CMSS1Q9BQ75 279 aaKnown RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 NUP205Q92621 2012 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 BCAS1O75363 584 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 EMX1Q04741 257 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 TBRG1Q3YBR2 411 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR2G6Q5TZ20 316 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 PGAP1Q75T13 922 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 DNAJC22Q8N4W6 341 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZNF582Q96NG8 517 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 UBQLN2Q9UHD9 624 aa16.24■□□□□ 0.19
CDC42EP3-201ENST00000295324 PRAMEF4O60810 478 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 IGHV3-9P01782 118 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 CAPNS1P04632 268 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 RIPPLY1Q0D2K3 151 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 MEP1BQ16820 701 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 KDM8Q8N371 416 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZNF511Q8NB15 262 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR4D9Q8NGE8 314 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 SPACA9Q96E40 222 aaPredicted RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 PHB2Q99623 299 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 BCL2L10Q9HD36 194 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 SGCEO43556 437 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 TK1P04183 234 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 RAB40ALP0C0E4 278 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZNF14P17017 642 aaPredicted RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 CYCSP99999 105 aaKnown RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 RAB40AQ8WXH6 277 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 PRRT1Q99946 306 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 GMPR2Q9P2T1 348 aaKnown RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 TP53TG5Q9Y2B4 290 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 AKAIN1P0CW23 69 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZMAT1Q5H9K5 638 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 RASD2Q96D21 266 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 WWTR1Q9GZV5 400 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR2S2Q9NQN1 319 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 TAS2R3Q9NYW6 316 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 HRO43593 1189 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 RAB31Q13636 194 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR56B1Q8NGI3 324 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZNF286AQ9HBT8 521 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 TBCCD1Q9NVR7 557 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 P4HTMQ9NXG6 502 aa16.23■□□□□ 0.19
CDC42EP3-201ENST00000295324 CXCL13O43927 109 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 ADAM23O75077 832 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 NKAIN4Q8IVV8 208 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 TSPAN10Q9H1Z9 355 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CTSFQ9UBX1 484 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CEP290O15078 2479 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 ALDOBP05062 364 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MSR1P21757 451 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MMP11P24347 488 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 SUMO3P55854 103 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 IKZF1Q13422 519 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR6F1Q8NGZ6 308 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 LIPHQ8WWY8 451 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MAN2C1Q9NTJ4 1040 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 NKX6-3A6NJ46 265 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 DNASE1P24855 282 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MYBPHQ13203 477 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 Q499Y3 187 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 ESCO2Q56NI9 601 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 SERPINA12Q8IW75 414 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 TIMD4Q96H15 378 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 RANBP3Q9H6Z4 567 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 NLKQ9UBE8 527 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 LTBQ06643 244 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 OR8B8Q15620 311 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 GLB1L2Q8IW92 636 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 UTP4Q969X6 686 aaKnown RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 FKRPQ9H9S5 495 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 PIP5K1CO60331 668 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 ETHE1O95571 254 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CA5AP35218 305 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CX3CR1P49238 355 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms