RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CHST11Q9NPF2 352 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 KIF26BQ2KJY2 2108 aa12.89□□□□□ -0.35
RTFDC1-201ENST00000023939 PMS2P1A4D2B8 440 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CASKO14936 926 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 SERPINA3P01011 423 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CD8BP10966 210 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 IMPDH2P12268 514 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 AHCYP23526 432 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 OXA1LQ15070 435 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PAMR1Q6UXH9 720 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 TRILQ7L0X0 811 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PLCZ1Q86YW0 608 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PM20D2Q8IYS1 436 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 ESX1Q8N693 406 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CEP19Q96LK0 163 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 B3GNT4Q9C0J1 378 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CDCP1Q9H5V8 836 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 FBXL2Q9UKC9 423 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 B9D1Q9UPM9 204 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 GPR179Q6PRD1 2367 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 IGLV1-36A0A0B4J1U3 117 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 A0A1W2PNU3 283 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 HSPB2A8KAH6 182 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 H7C1C5 153 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PHYHO14832 338 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 GPRIN2O60269 458 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 GTF2E2P29084 291 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 DAP3P51398 398 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 LCN6P62502 163 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 OR7A5Q15622 319 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 HSPB2Q16082 182 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 ZNF239Q16600 458 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CCDC157Q569K6 752 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 C3orf33Q6P1S2 294 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 LYPD4Q6UWN0 246 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 PHYHIPQ92561 330 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 GHSRQ92847 366 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 CCDC32Q9BV29 185 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 GPR87Q9BY21 358 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 WDR76Q9H967 626 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 TBCCD1Q9NVR7 557 aa12.88□□□□□ -0.35
RTFDC1-201ENST00000023939 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 CPAMD8Q8IZJ3 1885 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC22A23A1A5C7 686 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 CENPBD1B2RD01 187 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 C21orf140B9A014 251 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SNPHO15079 494 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 GATBO75879 557 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SERPINA7P05543 415 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 TACSTD2P09758 323 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 ALOX5APP20292 161 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 IL11P20809 199 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 RPS15P62841 145 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 EGR3Q06889 387 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC3A1Q07837 685 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 INSL4Q14641 139 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 DDI2Q5TDH0 399 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC22A10Q63ZE4 541 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 NHLRC1Q6VVB1 395 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 RPTNQ6XPR3 784 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 ASB10Q8WXI3 467 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 INTS14Q96SY0 518 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 GNG8Q9UK08 70 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 GRIP1Q9Y3R0 1128 aa12.87□□□□□ -0.35
RTFDC1-201ENST00000023939 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 SEC14L5O43304 696 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 AKR7A3O95154 331 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 ABHD16AO95870 558 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 PLGP00747 810 aaPredicted RBP12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 TFPIP10646 304 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 CRABP1P29762 137 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 OTX2P32243 289 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 TLE3Q04726 772 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 MYBPHQ13203 477 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms