RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TIMP4Q99727 224 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 MND1Q9BWT6 205 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 TXNIPQ9H3M7 391 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 ZFP64Q9NPA5 681 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 B3GAT1Q9P2W7 334 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 TNFRSF10DQ9UBN6 386 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 ERGIC3Q9Y282 383 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 CEP295Q9C0D2 2601 aa15.78■□□□□ 0.12
PHGDH-232ENST00000641947 FAM171A2A8MVW0 826 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 ZNF701M0R085 212 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-232ENST00000641947 RAMP1O60894 148 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 TFP02787 698 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 HSMCR30P0CW71 290 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 PYCR1P32322 319 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 RRADP55042 308 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 TMBIM6P55061 237 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 RPL27P61353 136 aaKnown RBP15.77■□□□□ 0.12
PHGDH-232ENST00000641947 TLE3Q04726 772 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 CDC20Q12834 499 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 MFSD13AQ14CX5 517 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 CTF1Q16619 201 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 GPR139Q6DWJ6 353 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 NHLRC1Q6VVB1 395 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 RFLNBQ8N5W9 214 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 ARIH2OSQ8N7S6 290 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 TBX5Q99593 518 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 MGLLQ99685 303 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 JAM3Q9BX67 310 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 ERVK13-1Q9NX77 482 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 HAO2Q9NYQ3 351 aa15.77■□□□□ 0.12
PHGDH-232ENST00000641947 EXOSC1Q9Y3B2 195 aaKnown RBP15.77■□□□□ 0.12
PHGDH-232ENST00000641947 ZNF407Q9C0G0 2248 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 TMEM129A0AVI4 362 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 OR5H15A6NDH6 313 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 TRIM64BA6NI03 449 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 C12orf71A8MTZ7 269 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 MYL12BO14950 172 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 ARHGEF9O43307 516 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 OR6A2O95222 327 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 SBK2P0C263 348 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 CD36P16671 472 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 GTF2E2P29084 291 aaKnown RBP15.77■□□□□ 0.11
PHGDH-232ENST00000641947 ACVR1BP36896 505 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 DIO1P49895 249 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 TMED1Q13445 227 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 GGTLC2Q14390 218 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 SPHARQ15513 63 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 SSX1Q16384 188 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 ARMC4Q5T2S8 1044 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 SMPDL3BQ92485 455 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 TM9SF4Q92544 642 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 RPL3LQ92901 407 aaKnown RBP15.77■□□□□ 0.11
PHGDH-232ENST00000641947 MIB2Q96AX9 1013 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 FAM173AQ9BQD7 235 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 NDEL1Q9GZM8 345 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 HDGFL3Q9Y3E1 203 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 CSAG2Q9Y5P2 127 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 SPTBN4Q9H254 2564 aa15.77■□□□□ 0.11
PHGDH-232ENST00000641947 PRRC2CQ9Y520 2896 aaKnown RBP15.76■□□□□ 0.11
PHGDH-232ENST00000641947 BOD1L1Q8NFC6 3051 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 H0YC42 278 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 TLX3O43711 291 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-232ENST00000641947 GABARAPO95166 117 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 MYL12AP19105 171 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 ATP6V1E1P36543 226 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 SLC25A1P53007 311 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 OR2B6P58173 313 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 MFAP5Q13361 173 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 TSTQ16762 297 aaKnown RBP15.76■□□□□ 0.11
PHGDH-232ENST00000641947 WIPI1Q5MNZ9 446 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-232ENST00000641947 PM20D2Q8IYS1 436 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 OR6V1Q8N148 313 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 FDCSPQ8NFU4 85 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 OR14L1PQ8NHC6 308 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 OR2B2Q9GZK3 357 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 SYT4Q9H2B2 425 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 ZNF703Q9H7S9 590 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-232ENST00000641947 FANCFQ9NPI8 374 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 WASF3Q9UPY6 502 aa15.76■□□□□ 0.11
PHGDH-232ENST00000641947 A0A1W2PNV4 684 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 NME2P1O60361 137 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 LALBAP00709 142 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 SP1P08047 785 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 CELA3AP09093 270 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 IFNGR1P15260 489 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 NME2P22392 152 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 GDF1P27539 372 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 TGFBR1P36897 503 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 RGS6P49758 472 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 CLK1P49759 484 aaKnown RBP15.75■□□□□ 0.11
PHGDH-232ENST00000641947 CCL11P51671 97 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 HCCSP53701 268 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 POU3F1Q03052 451 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-232ENST00000641947 TMPPEQ6ZT21 453 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 SSX6Q7RTT6 188 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 ATCAYQ86WG3 371 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 RAB2BQ8WUD1 216 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 ASB10Q8WXI3 467 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 GATAD2BQ8WXI9 593 aa15.75■□□□□ 0.11
PHGDH-232ENST00000641947 TXNDC15Q96J42 360 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms